DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caper and slirp

DIOPT Version :10

Sequence 1:NP_609095.1 Gene:Caper / 33989 FlyBaseID:FBgn0031883 Length:594 Species:Drosophila melanogaster
Sequence 2:XP_002938905.4 Gene:slirp / 100489427 XenbaseID:XB-GENE-22069127 Length:99 Species:Xenopus tropicalis


Alignment Length:83 Identity:24/83 - (28%)
Similarity:38/83 - (45%) Gaps:3/83 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLL 303
            ||..::...|.:|:|:|:||..|.|:...|....:|...:|..::.|...|.:..||......|.
 Frog    11 VFVSRVPWTVASRELKEYFSQYGVVKKCLLPFDKETGFHRGFCWVGFASEEGLQNALQKDAHLLE 75

  Fly   304 GVPIMVQHTQ---AEKNR 318
            |..:.||..:   |..||
 Frog    76 GSKLQVQQNKRLAANTNR 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaperNP_609095.1 SF-CC1 213..578 CDD:273721 24/83 (29%)
slirpXP_002938905.4 RRM_SLIRP 10..82 CDD:409688 19/70 (27%)

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