DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab37

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_067386.3 Gene:Rab37 / 58222 MGIID:1929945 Length:223 Species:Mus musculus


Alignment Length:210 Identity:91/210 - (43%)
Similarity:129/210 - (61%) Gaps:17/210 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQG-ATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
            :|....|::|:|::||||||.:.:|..|.|..|.. ||:|:||..|.|.|:|.::||||||||||
Mouse    25 NYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGARVKLQIWDTAGQ 89

  Fly    67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIP 130
            |||||:|.:|||.|.||:|:|||:.|.:||.:..||.||.|||...|:.:|:|||.| ..:|.|.
Mouse    90 ERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIR 154

  Fly   131 TQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIG 195
            ::.||..|:::.:.|:|||||...|||..|..||.||              ...|.||.:..|..
Mouse   155 SEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKEL--------------KYRAGRQPDEPSFQ 205

  Fly   196 LGSF-SAKAAQSNCC 209
            :..: .::..:|:||
Mouse   206 IRDYVESQKKRSSCC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 83/166 (50%)
Rab37NP_067386.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Rab26 31..220 CDD:206695 88/202 (44%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 52..67 6/14 (43%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 85..102 13/16 (81%)
Blue background indicates that the domain is not in the aligned region.

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