DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab32

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster


Alignment Length:212 Identity:70/212 - (33%)
Similarity:113/212 - (53%) Gaps:20/212 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKI-KLQIWDTAGQERFR 70
            |:||:::|..|.|||..::|:....|.....|||||||.:|.::.:...| :||:||.||||||.
  Fly   483 LYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQERFG 547

  Fly    71 SITQSYYRSAHALILVYDISCQPTFDCLPDWLRE----IQEYANSKVLKILVGNKTDRDDREIPT 131
            ::|:.||:.|....:|:|::...||||:..|..:    :|....|.:..||:.||.|::.:.|.|
  Fly   548 NMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQGIIT 612

  Fly   132 QIG--EEFAKQHDMY-FLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSS 193
            |..  :|:.:::... :.||||||..|::    |.|..|:.:....|...||..|      :|..
  Fly   613 QPEKMDEYVRENGFAGWFETSAKENINID----EAARALVNKILINDKLISADLA------DGDK 667

  Fly   194 IGLGSFSAKA--AQSNC 208
            ..|.:..|..  |::.|
  Fly   668 FNLSAADATGSDAKNKC 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 60/168 (36%)
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021
Rab32_Rab38 484..686 CDD:206692 69/211 (33%)
Blue background indicates that the domain is not in the aligned region.

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