Protein Alignment Rab30 and Rab3a

DIOPT Version :10

• Sequence 1: NP_609094.1
• Gene: Rab30 / 33988
• FlyBaseID: FBgn0031882
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_037150.2
• Gene: Rab3a / 25531
• RGDID: 3528
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 190
• Identity: 76/190 - (40%)
• Similarity: 121/190 - (63%)
• Gaps: 8/190 - (4%)

  Fly     2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
            :::.::|||:::||:.||||..:.|:....|.|...:|:|:||.:||:....::|||||||||||
  Rat    17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQ 81

  Fly    67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA--NSKVLKILVGNKTD-RDDRE 128
            ||:|:||.:|||.|...||:|||:.:.:|:.:.||..:|:.|:  |::||  |||||.| .|:|.
  Rat    82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVL--LVGNKCDMEDERV 144

  Fly   129 IPTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQ--ARSKDGSSSAAAAAAQ 186
            :.::.|.:.|......|.|.|||:..||::.| |...::|.:  :.|.|.:..|...|.|
  Rat   145 VSSERGRQLADHLGFEFFEASAKDNINVKQTF-ERLVDVICEKMSESLDTADPAVTGAKQ 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_609094.1	Rab30	1..168	CDD:133314	70/168 (42%)
Rab3a	NP_037150.2	Rab3	22..186	CDD:206657	71/166 (43%)
		Switch 1. /evidence=ECO:0000269|PubMed:10025402, ECO:0007744|PDB:1ZBD	49..58		3/8 (38%)
		Switch 2. /evidence=ECO:0000269|PubMed:10025402, ECO:0007744|PDB:1ZBD	80..96		10/15 (67%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	194..220		3/10 (30%)