DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab19

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_035356.1 Gene:Rab19 / 19331 MGIID:103292 Length:217 Species:Mus musculus


Alignment Length:190 Identity:82/190 - (43%)
Similarity:131/190 - (68%) Gaps:14/190 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
            |:..:|||::|:|::.|||||:|:.|..|::...|..||||||.::::|::|:|:|:|:||||||
Mouse    12 ENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQ 76

  Fly    67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDR-DDREIP 130
            ||||:|||||||||||.|:.||::.:.||:.:|.|:.||::|..:.::.:|:|||:|. :.|.:.
Mouse    77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVL 141

  Fly   131 TQIGEEFAKQHDMY-FLETSAKEAENVERLFYEIAAELIG------------QARSKDGS 177
            .:.....|::|.:. .|||||||:.|::.:|..:|.|||.            |..|:|.|
Mouse   142 FEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHLYGESAQQGLSQDSS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 76/167 (46%)
Rab19NP_035356.1 Rab19 15..179 CDD:133267 74/163 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 6/14 (43%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 13/14 (93%)

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