Protein Alignment Rab30 and Rab1b

DIOPT Version :10

• Sequence 1: NP_609094.1
• Gene: Rab30 / 33988
• FlyBaseID: FBgn0031882
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_001103449.1
• Gene: Rab1b / 100126191
• RGDID: 1642882
• Length: 201
• Species: Rattus norvegicus
• Alignment Length: 208
• Identity: 93/208 - (44%)
• Similarity: 136/208 - (65%)
• Gaps: 11/208 - (5%)

  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQE 67
            :|.:|||::|:|::||||:||:.||....:.....:||||||.|:|:|::|:.||||||||||||
  Rat     4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68

  Fly    68 RFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDDRE-IPT 131
            |||:||.||||.||.:|:|||::.|.::..:..||:||..||:..|.|:|||||:|...:: :..
  Rat    69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDN 133

  Fly   132 QIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGL 196
            ...:|||....:.|||||||.|.|||:.|..:|||:  :.|...|::|.        .|..::.:
  Rat   134 TTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI--KKRMGPGAASG--------GERPNLKI 188

  Fly   197 GSFSAKAAQSNCC 209
            .|...|:|...||
  Rat   189 DSTPVKSASGGCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_609094.1	Rab30	1..168	CDD:133314	84/165 (51%)
Rab1b	NP_001103449.1	Rab1_Ypt1	7..172	CDD:206661	83/166 (50%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4	30..45		4/14 (29%)
		Switch 2 region, required for interaction with REP1/CHM. /evidence=ECO:0000250|UniProtKB:Q9H0U4	64..83		15/18 (83%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4	65..80		12/14 (86%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	173..201		6/35 (17%)