DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmgcl and LEU4

DIOPT Version :10

Sequence 1:NP_609089.1 Gene:Hmgcl / 33978 FlyBaseID:FBgn0031877 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_014295.1 Gene:LEU4 / 855619 SGDID:S000005048 Length:619 Species:Saccharomyces cerevisiae


Alignment Length:301 Identity:58/301 - (19%)
Similarity:97/301 - (32%) Gaps:70/301 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RDGLQNEPKLLPAATKIELINQLSETGLRTIEA-------TSF-------------VSAKWVPQM 78
            |||.|:.|..:....|.|..::|...|.:.||.       |.|             ||.:.:.|.
Yeast    69 RDGNQSLPDPMSVEQKKEYFHKLVNIGFKEIEVSFPSASQTDFDFTRYAVENAPDDVSIQCLVQS 133

  Fly    79 GDN-----AEVLKGIRKVTGISYPVLTPNLKGFESALEAGAEEVAVFGAASDAFSLKNVNCTAAE 138
            .::     .|.|.|.:|.|                        :..:.|.||.|.....|.:..|
Yeast   134 REHLIKRTVEALTGAKKAT------------------------IHTYLATSDMFREIVFNMSREE 174

  Fly   139 AIERFKPVLKAAQK------HGVRVRGYVSTVVGC----PYEGAVAPSAVVKVVEALYQMGCYEI 193
            ||.:.....|..:|      .....|........|    |.|.||.....||......:......
Yeast   175 AISKAVEATKLVRKLTKDDPSQQATRWSYEFSPECFSDTPGEFAVEICEAVKKAWEPTEENPIIF 239

  Fly   194 SLGDTIGVGTPGTMRRMLDEVTKVVPAKD---LAVHCHDTYGQALSNILVSLDYGIRVVDSSVSG 255
            :|..|:.|.:|......::.....:..::   ::.|||:..|..::...:.:..|...|:     
Yeast   240 NLPATVEVASPNVYADQIEYFATHITEREKVCISTHCHNDRGCGVAATELGMLAGADRVE----- 299

  Fly   256 LGGCPYAKG-ASGNAATEDVVYLLHGMGLDTGVNLDKLIQV 295
              ||.:..| .:||.....|...::..|:...::...|..|
Yeast   300 --GCLFGNGERTGNVDLVTVAMNMYTQGVSPNLDFSDLTSV 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgclNP_609089.1 DRE_TIM_HMGL 28..300 CDD:163676 58/301 (19%)
LEU4NP_014295.1 leuA_yeast 35..596 CDD:273371 58/301 (19%)

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