DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmgcl and LEU9

DIOPT Version :9

Sequence 1:NP_001285696.1 Gene:Hmgcl / 33978 FlyBaseID:FBgn0031877 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_014751.1 Gene:LEU9 / 854275 SGDID:S000005634 Length:604 Species:Saccharomyces cerevisiae


Alignment Length:295 Identity:58/295 - (19%)
Similarity:107/295 - (36%) Gaps:40/295 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RDGLQNEPKLLPAATKIELINQLSETGLRTIEATSFVSAK-----WVPQMGDNAEVLKGIRKVTG 93
            |||.|:.|..:..|.|.|..::|...|.:.|| .||.||.     :.....:||....||:.:..
Yeast    68 RDGNQSLPDPMSVAQKKEYFHKLINIGFKEIE-VSFPSASQTDFDFTRYAVENAPDDVGIQCLVQ 131

  Fly    94 ISYPVLTPNLKGFESALEAGAEEVAVFGAASDAFSLKNVNCTAAEAIERFKPVLKAAQK------ 152
            ....::...::....|..|   .:..:.|.||.|.....|.:..|||.:.....|..:|      
Yeast   132 SREHLIKRTVEALTGAKRA---TIHTYLATSDMFREIVFNMSREEAISKAVEATKLVRKLTKDDP 193

  Fly   153 --------HGVRVRGYVSTVVGCPYEGAVAPSAVVKVVEALYQMGCYEISLGDTIGVGTPGTMRR 209
                    :......:..|    |.|.||.....||......:......:|..|:.|.:|.....
Yeast   194 SQQATRWSYEFSPECFSDT----PGEFAVEICEAVKKAWEPTEENPIIFNLPATVEVASPNVYAD 254

  Fly   210 MLDEVTKVVPAKD---LAVHCHDTYGQALSNILVSLDYGIRVVDSSVSGLGGCPYAKG-ASGNAA 270
            .::..:..:..::   ::.|||:..|..::...:.:..|...|:       ||.:..| .:||..
Yeast   255 QIEYFSTHITEREKVCISTHCHNDRGCGVAATELGMLAGADRVE-------GCLFGNGERTGNVD 312

  Fly   271 TEDVVYLLHGMGLDTGVNLDKLIQVGRYI--CTEL 303
            ...|...::..|:...::...|..:...:  |.::
Yeast   313 LVTVAMNMYTQGVSPNLDFSDLTSISEIVHRCNKI 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgclNP_001285696.1 HMGL-like 25..299 CDD:279072 57/287 (20%)
DRE_TIM_HMGL 28..300 CDD:163676 57/290 (20%)
LEU9NP_014751.1 leuA_yeast 34..596 CDD:273371 58/295 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343034
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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