DRSC/TRiP Functional Genomics Resources

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Protein Alignment SA1 and stag2b

DIOPT Version :10

Sequence 1:NP_477268.2 Gene:SA1 / 33974 FlyBaseID:FBgn0020616 Length:1127 Species:Drosophila melanogaster
Sequence 2:XP_021328465.1 Gene:stag2b / 560751 ZFINID:ZDB-GENE-030131-2785 Length:1276 Species:Danio rerio


Alignment Length:1089 Identity:494/1089 - (45%)
Similarity:700/1089 - (64%) Gaps:57/1089 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DDDEDDFFAPIARKRKTPATRKGPTERKERVERPRKEPVDK--GHHERIDSEREITTDENSLYYI 120
            |.|:.|....|..|.|....:|||.|:.:.:.:    .|.:  |||:....|..:      |:.:
Zfish    26 DFDDPDGRNAIIGKGKAKKGKKGPGEKGKGMGK----GVGRMNGHHQENGMENVM------LFEV 80

  Fly   121 VRHSKNPIASIVDQWIEQYKANRETALVALMQFFINASGCKGKISEDIQYPVDHTSIIRRMTEEF 185
            ||..|:.:.|:||.|||.||.:|:.||:.|:.|||..|||||.:|.::...:.::.|||:|||||
Zfish    81 VRLGKSAMQSVVDDWIESYKHDRDVALLDLINFFIQCSGCKGVVSGEMFRNMQNSEIIRKMTEEF 145

  Fly   186 DEESGEYPLIMSGTQWRKFKNNFCDFVQTLVKQCQYSIIYDQFLMDNVISLLTGLSDSQVRAFRH 250
            ||:||:|||.|:|.||:|||::||:|:..||:|||||||||:::||.||||||||||||||||||
Zfish   146 DEDSGDYPLTMTGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRH 210

  Fly   251 TATLAAMKLMTALVDVALLVSNNFDNAAKQFEAERVKSRDRRASDRLDSLMTKRSELEENMDEIK 315
            |:||||||||||||:|||.:|.|.||..:|:||||.|...:||:|||:.|:.||.||:||.|||:
Zfish   211 TSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANDRLELLLQKRKELQENQDEIE 275

  Fly   316 SMLTYMFKSVFVHRYRDSLPDIRAICMAEIGIWMENYPQNFLDDSYLKYIGWTLHDKIGEVRLRC 380
            :|:..:||.||||||||::.:|||||:.|||:||:.|...||:||||||:|||:|||.|||||:|
Zfish   276 NMMNAIFKGVFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKC 340

  Fly   381 LQSLLPLYEKDELKGKLELFTSKFKDRIVAMTLDKEFEVSVHAVKLVISILKIHPEILADKDCEI 445
            |.:|..||...||..|||||||:||||||:||||||::|:|.|:||:..:|....|:|..:|||.
Zfish   341 LTALQGLYHNRELNAKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCES 405

  Fly   446 VYELVYSSHRGVAQAAAEFLNVRLF-HLTADMEETKTKRGKVRMPNTPLVRDLVQFFIESELHEH 509
            ||.||||:||.||.||.|||..:|| |...:.:....:||: :..|..|::..|.||:|||||||
Zfish   406 VYHLVYSAHRPVAVAAGEFLFKKLFSHRDPEDDSMPKRRGR-QSVNANLIKTTVFFFLESELHEH 469

  Fly   510 GAYLVDSFID-SNDMVRDWECMTDLLLEEPGPNEEVLDNKQESTLIEIMVSSVKQSATGEVPVGR 573
            .||||||..| :.::::|||||..|||:||.|.||.|.::||:.||||::.:::|:|....||||
Zfish   470 AAYLVDSMWDCAAELLKDWECMISLLLDEPLPGEEALTDRQETALIEILLCTIRQAAECHPPVGR 534

  Fly   574 ASNRKCTLSAKELKAIQDEKAKLTEHFIVTLPSLLEKYQADSEKLANLLAVPQYFDLNLYTTNRQ 638
            .:.:: .|:|||.|...|::.::||.|.:.||:||.||..|:||:.|||.:||:|||.:|||.|.
Zfish   535 GTGKR-VLTAKEKKTQLDDRTRMTELFAIALPALLAKYSVDAEKVTNLLQLPQFFDLEIYTTGRL 598

  Fly   639 EGNLQALLDRINQVMSMHTGREVLETCAKTLECLCAEGSATYTRCNIARSNIIESAVNKYKDAIE 703
            |.:|.:||.:|.:::..||..:|||.|:||...||.|....:.|.:||||.:::..|:|:...:|
Zfish   599 EKHLDSLLRQIREIVEKHTDTDVLEACSKTYHSLCNEEFTIFNRVDIARSQLLDEQVDKFNKLLE 663

  Fly   704 EWRNLIQGEETPNEDDIYNITITLKVLSILYSSHNLNPWELFKSLFQDVEEAQSKENIDRCLPNE 768
            ::   :|..|.|:|||.|.:..|||.:|..|::|:|:.|:||.|.::.:.  ...||.|  :|.:
Zfish   664 DF---LQEGEDPDEDDAYQVLSTLKRISAFYNAHDLSKWDLFTSNYKLLN--TGIENGD--MPEQ 721

  Fly   769 ALVYCIEACYFSISWGLQYVENECESVNVTEVVAELRNNLDTFMGACFELTRDGPTVQIQEAAYQ 833
            .:|:.::..::.|.|.|..|...|..   .|.:..||..:..|...|........|. ::|.|:.
Zfish   722 IVVHALQCTHYVILWSLAKVSEGCYK---KEDMLTLRKQMRAFCLMCQRYLTSVNTA-VKEQAFT 782

  Fly   834 SICDLLIIFSDKLARSEIEHIRGLEYKSRMDEHLILDNFVQHYVF------SLKQDVAQDET--R 890
            .:||||:|||.::.....|.:..|.|.........|.||:..:||      |...|..||:.  :
Zfish   783 ILCDLLLIFSHQIISGGREALEPLVYTPEASLQSELLNFILDHVFIDQDEDSNSTDGQQDDEAGK 847

  Fly   891 IEELHKKRNFLACYCKLVVYNIIPTMRAASIFKYYVKCYNDYGDIIKATLGKAREINKVNFAMTL 955
            ||.|||:||.||.||||::||::.....|.|||.|::.|||||||||.|:.|.|:|:|:..|.||
Zfish   848 IEALHKRRNLLAAYCKLIIYNVVEMSTGADIFKQYMRYYNDYGDIIKETMSKTRQIDKIQCAKTL 912

  Fly   956 LLSLITVFKSLQEQSEDG-IVSKSSQEFVDLKELAKRFALTFGFDAIKNRESVAAIHRGGIYFA- 1018
            :|||..:|..:  .||.| ...:||..|..:||||:||:||||.|.:|.||::|.:|:.||.|| 
Zfish   913 ILSLQQLFNEM--LSELGPSFDRSSSAFCGIKELARRFSLTFGLDQLKTREAIAMLHKDGIEFAF 975

  Fly  1019 --ANKEPDDPVRAPTRLLFLEVLNEFNYKLLKQDKKVIMSFLDKIIPPAMPSSRAEEWQPLILYR 1081
              ||.:.|.  ..|..|.||::|:||:.||::|||:.:..:|::.:...|...|.:.|.|||.||
Zfish   976 KEANPQGDG--HPPLNLAFLDILSEFSSKLMRQDKRTVHMYLERFMTFQMALQREDCWLPLISYR 1038

  Fly  1082 NSLLHGETDQ------------APVASKRA--YTRKRRDHDEEEEEEED 1116
            |||..|..|.            :.|.||:|  .|.||:..:||.....:
Zfish  1039 NSLQAGGDDDTMSVVSGISSRGSSVRSKKAKPATAKRKLPEEESSSSSE 1087

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA1NP_477268.2 IRR1 66..>426 CDD:227824 204/361 (57%)
STAG 190..303 CDD:462502 77/112 (69%)
stag2bXP_021328465.1 IRR1 95..>388 CDD:227824 187/292 (64%)
STAG 150..263 CDD:462502 77/112 (69%)

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