DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18304 and mtcl3b

DIOPT Version :10

Sequence 1:NP_001260170.1 Gene:CG18304 / 33969 FlyBaseID:FBgn0031869 Length:1901 Species:Drosophila melanogaster
Sequence 2:XP_005162467.1 Gene:mtcl3b / 336052 ZFINID:ZDB-GENE-081022-198 Length:773 Species:Danio rerio


Alignment Length:937 Identity:184/937 - (19%)
Similarity:340/937 - (36%) Gaps:325/937 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 SSSTSSSSVRRKEADSVASKEIKRQTVPAASISHSNSTSSTAS-TASKSQDTNGMQEQMKALKLE 363
            ||:..:...||......::|       ||.:...|.|.||||| ..:||                
Zfish    15 SSADGTEGRRRPSPGQTSAK-------PALNPRGSRSASSTASKPGAKS---------------- 56

  Fly   364 LETMKTRAEKAEREKSDILLRRLASMDTASNRTAASEALNLQQKLNEMKEQLDRVTEDKRKLNLR 428
                 |:..:.|::...:.||..|::     |.|.:||      :.|.:|::||......:..||
Zfish    57 -----TKGREGEQDTRVVKLRGAAAV-----RGAETEA------ILETEERIDRAPPPDTRRALR 105

  Fly   429 M-----------------------------------------------------KELENKG---- 436
            .                                                     |.|...|    
Zfish   106 FPCVKRDSSAEKLDGAPGGVRGGQAAAGGEYVGCGPAFWGGGCLQSELIQYHINKRLRKSGRMQR 170

  Fly   437 -------------SESELRRKLQAAEQICEELMEENQSAKKEILNLQAEMDEVQDTFRDDEVKAK 488
                         :|..:.::.:|.::..|.|.:||...|..|..::.||:|::|||.:::....
Zfish   171 QTPGETQPGSGAQAEEVMTQQDEALQEEIERLEDENDELKSTIEEMRTEMEEMRDTFYEEDTCQL 235

  Fly   489 TSLQKDLEKATKNCRILSFKLKKSDRKIETLEQERQSSFNAELSNKIKKLEEELRFSNELTRKLQ 553
            ..::::||:|.||||||.::|:|::||  .|...:....:.:|   ::.||::|:.:.:::.:|.
Zfish   236 DEMRRELERANKNCRILQYRLRKAERK--RLRYAQTGEIDEDL---LRSLEQDLKVAKDVSVRLH 295

  Fly   554 AEAEELRNPGKK----------KAPMLGVLGKSTSADAKFTRESLTRGGSQEDPQHLQRELQDSI 608
            .|.|.:.....|          |...:.|..::...:....:||..|.|| :|.|..:|:.|...
Zfish   296 HELENVEEKRTKTEDENERLRQKLIEVEVTKQALQLELDKAKESQKRRGS-KDAQKPERKTQTPT 359

  Fly   609 ERET-DLKDQLKFAEEELQRLR------DRERKRVRFSCGTQTEVPLEVVAFPRGTQTVATVQSD 666
            |.:: |||.||.|.:||...:|      |:|:.|:.                 :..|...:...|
Zfish   360 EEDSEDLKCQLAFIKEEATLMRKKMAKIDKEKDRLE-----------------QELQKYRSFYGD 407

  Fly   667 MSTSVENLVTSNVAVTQTDFEVPDRNVSIERETMSSPFAGLFPPSSSSRVGQSGSLLFPSAISHV 731
            :.                                                               
Zfish   408 LD--------------------------------------------------------------- 409

  Fly   732 LLSGAGRKLSPTPHPHRLAPEVHADRDEGISDEDDPAELRILLELNEQEASILRLKVEDLEKENA 796
                       :|||...|......|:         :||::.|.|.|:||:||..|:.:||.|| 
Zfish   410 -----------SPHPKGEAGGPPTTRE---------SELKLRLRLVEEEANILGRKIVELEVEN- 453

  Fly   797 ESKKYVRELQAKL----RQDSSNGSKSSL-----LSLGTSSSAAEKKVKTLNEELVQLRRTLTEK 852
                  |.|:|:|    ..:||||..|..     ...|:..|...::::.:.:|...|||.|.:.
Zfish   454 ------RGLRAELDDLRGDESSNGGLSGAEGGIGREQGSELSELRQQLQLVEDEAELLRRNLADV 512

  Fly   853 EQTVDSLKNQLSKLDTLE--------------------TENDKLAKENKRLLALRKASEKTGEVD 897
            |:....:.::|:||...|                    ::::.|.:|.|  .|.::.:|.:|:| 
Zfish   513 EEQNKRVTSELNKLRFKEGTRHASGSNATGSNNGGGDSSKSEALQEELK--AARKQINELSGKV- 574

  Fly   898 QKMKESLAQAQRERDELTARLKRMQLEAEDKLPPRTAKRVNDLTP-----------------KSH 945
                   .|.|.|...|.:.::|..|.:...:.||.:...:|..|                 ..|
Zfish   575 -------MQLQYENRVLLSNMQRYDLASHLAVTPRDSDAESDGGPAIGGRRGSDDDSSSSRLPPH 632

  Fly   946 LKK----WVEELEDEISEMRVMLSSSGTDQLKALQSAKGALEEDLRKCKQKLSLAEGDVQRL--- 1003
            .|:    ..|...:|:...|.:   :.|..|.:.:||: .|...:|..:|.:.: ..:.:||   
Zfish   633 RKREGPVGGESDSEEVRNARCL---TPTRSLYSPESAR-LLSRSIRDRQQMIDI-RAEAERLGRT 692

  Fly  1004 --KLLNGSSSKVSELEQKLKRGDEEAKKLNSKLKDLED--KVKKQEAQLKLGETSKSTWESQSKR 1064
              :|:..:|:.::|....:..||     |..:::|.:|  ::::.|...::        .||.|.
Zfish   693 IDRLIADTSNIIAEARVFVANGD-----LFGRMEDEDDGGRIREHELLFRI--------NSQMKT 744

  Fly  1065 EKEKLSSLEKDMEKQAKEKEKLEAKIS 1091
            .:::|......:|....|:...|..:|
Zfish   745 FRKELQGFIDRLEVPKPEERDSEEPLS 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18304NP_001260170.1 SMC_prok_B <354..1093 CDD:274008 168/882 (19%)
SMC_prok_B 831..>1544 CDD:274008 58/309 (19%)
PHA03307 1657..>1901 CDD:223039
mtcl3bXP_005162467.1 Smc <182..>578 CDD:440809 110/518 (21%)
SOGA 362..456 CDD:463264 34/200 (17%)
SOGA 487..584 CDD:463264 21/106 (20%)
Blue background indicates that the domain is not in the aligned region.

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