DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18304 and mtcl1

DIOPT Version :10

Sequence 1:NP_001260170.1 Gene:CG18304 / 33969 FlyBaseID:FBgn0031869 Length:1901 Species:Drosophila melanogaster
Sequence 2:XP_031759528.1 Gene:mtcl1 / 116406444 XenbaseID:XB-GENE-6047696 Length:1927 Species:Xenopus tropicalis


Alignment Length:2025 Identity:419/2025 - (20%)
Similarity:743/2025 - (36%) Gaps:621/2025 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 MNLLKKQRSLNSRENSRERS-VPRREEESESTATPTPVVPD-RPERSKSGTSLNQ-----LAQAE 251
            |.....:..|::.:....|: .|.|....|..|...|..|. .|.:|.|.:..:|     .|.:.
 Frog     1 METFSSEHKLHAEKKRLNRAPSPARPFLREPHARAPPAKPSVLPPKSPSSSIRHQSPAAPAAHSR 65

  Fly   252 QKRAALP-------PKKV--AVASTTTASSSNSSSTSLKTSNSTSASNEVKVVTSTSSSSTSSSS 307
            ..|.:.|       |.|.  |.||.||..:|.....:.:.|....|..|:.:   .||...:.:.
 Frog    66 LSRRSTPLAKEKPSPAKPCGAKASLTTKRASRPHHGAAEPSGKGGARRELLL---PSSPQPAVAP 127

  Fly   308 VRRK--EADSVASKEIKRQTVPAASISHSNSTSSTASTASKSQDTNGMQEQMKALKLELETMKTR 370
            .||:  ..||         |:....:||::|:|..:...|         |.:.....:|:...:.
 Frog   128 TRRRLLVLDS---------TLAGGRVSHTDSSSDLSDCPS---------EPLSDEHRQLQAQSSD 174

  Fly   371 AEKAEREKSDILLRRLASMDTASNRTAASEALNLQQKLNEMKEQLDRVTEDKRKLNLRMKELENK 435
            .|....|::.....|:.::||...|.||..:       :|.:|......:.||...      .::
 Frog   175 NESGSSEQAVARSERVQNVDTHRQRNAAPPS-------DEPRETGSMGAQYKRPAT------PSR 226

  Fly   436 GSESELRRKLQAAEQICEELMEENQSAKKEILNLQAEMDEVQDTFRDDEVKAKTSLQKDLEKATK 500
            ..|.:|.|:|       |||..||...|.|:..|:|||:|::|::.:::|.....|:::|::|.|
 Frog   227 VQEEDLLREL-------EELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANK 284

  Fly   501 NCRILSFKLKKSDRKIETLEQERQSSFNAELSNKIKKLEEELRFSNELTRKL------------- 552
            |||||.::|:|:::|  :|:..:....:.||   |:.||::|:.:.:::.:|             
 Frog   285 NCRILQYRLRKAEQK--SLKVAQTGQVDGEL---IRSLEQDLKVAKDVSVRLHHELESVEEKRIK 344

  Fly   553 -QAEAEELRNPGKKKAPMLGVLGKSTSADAKFTRES-LTRGGSQEDPQHLQRELQDSIERETDLK 615
             :.|.||||    ::...:.:..::...:...|:|| |.|.||:|  .|.:::: .|.|...|||
 Frog   345 TEDENEELR----QQIIEMEITRQALHNELDRTKESTLKRKGSRE--MHKEKKI-ISQEDNADLK 402

  Fly   616 DQLKFAEEELQRLRDRERKRVRFSCGTQTEVPLEVVAFPRGTQTVATVQSDMSTSVENLVTSNVA 680
            .||:||:||...:|.:..|                                            :.
 Frog   403 CQLQFAKEEAALMRKKMAK--------------------------------------------LG 423

  Fly   681 VTQTDFEVPDRNVSIERETMSSPFAGLFPPSSSSRVGQSGSLLFPSAISHVLLSGAGRKLSPTPH 745
            ..:.|.|.       |.|...|.:..:..|.|:   |::|.                      |.
 Frog   424 KEKDDLEQ-------ELEKYKSIYGDVDGPLST---GETGG----------------------PP 456

  Fly   746 PHRLAPEVHADRDEGISDEDDPAELRILLELNEQEASILRLKVEDLEKENAESKKYVRELQAKLR 810
            ..|                  .|||::.|:|.|:||:||..|:.:||.||...|..:.:|:.:|.
 Frog   457 STR------------------EAELKLRLKLVEEEANILSRKIVELEVENRGIKAEMEDLRCQLE 503

  Fly   811 QDSSNGSKSSLLSLGTS------SSAAE--KKVKTLNEELVQLRRTLTEKEQTVDSLKNQLSKLD 867
            ::..  |:..:.|:.||      .||||  :.::.:.||...|||:::|.|.....|..:|::. 
 Frog   504 KEFL--SREYVSSIPTSPYGDSMESAAELRRHLQFVEEEAELLRRSISEIEDHNKQLTTELNRF- 565

  Fly   868 TLETENDKLAKENKRLLALRKASEKTGEVDQKMKESLAQAQRERDELTARLKRMQLEAEDKLPPR 932
                   |...|..    |....:.|.:.:..::|.|..|:.:.:||:.::  |:|:.|:::...
 Frog   566 -------KFGPEQD----LVWIDDSTSKCNGSVQEELKSARIQINELSGKV--MKLQYENRVLLS 617

  Fly   933 TAKRVNDLTPKSHLKKWVEELEDEISEMRVMLSSSGTDQLKALQ-SAKGAL--EEDLRKCKQKLS 994
            ..:|. ||.  .||........|..:|.......|.:|.....| ..:|.:  |.|..:..:|.|
 Frog   618 NVQRY-DLA--FHLGVRTASPRDSDAESDTGKKESDSDDGHPTQPKREGPIGGESDSEEACEKTS 679

  Fly   995 LAEGDVQRLKLLNGSSSKVSELEQK--------LKRGDEEAKKLNSKLKDLEDKVKKQEAQLKLG 1051
                ..:.:|...||....|:::.:        :||   ||:.|...|..|.........:.||.
 Frog   680 ----GFESVKPSEGSDLYSSDMKIREEAHTFLNIKR---EAEHLERTLDRLVTDTDSLIYEAKLQ 737

  Fly  1052 ETSKSTWESQSKREKEKLSSLEKDMEKQAKE-KEKLEAKISQLDAELLSAKKSAEKSKSSLEKEI 1115
            .||.|. |.|:..||..        |..|.| .|.:..|:.....||.:..:..:.|...|::.|
 Frog   738 VTSSSV-EFQTYPEKRG--------EISASEILENVNTKMKIFRKELQNFMEVVDCSGEGLKERI 793

  Fly  1116 KDLK-----TKASK--------SDSKQVQDLKKQ-VEEVQASLSAEQKRYEDLNNHWEKLSEETI 1166
            :||.     |::|.        |....:.:|.|: :.:.|.|...||..|:..::|.|......:
 Frog   794 EDLSPMPHLTESSSFLSNLTSVSRDSPIGNLGKELIPDFQQSKLREQMEYQLSHDHEEDTHHLLV 858

  Fly  1167 LMRAQLTTEKQ------------SLQAELNASKQK---IAEMDTIRIERTDMARKLSEAQ----- 1211
            ...:|...:..            ||:...:.|.:|   |.|:..|    .:..|:|.:.:     
 Frog   859 NHESQRRADGDSKHYRPGDKGCFSLELSNHVSPEKNATIRELQAI----LEQERRLHQEEHEKVT 919

  Fly  1212 KRIADLQAKALKTVNGNGAEYERTVLKNKLAEKEHEYERLRRENEM-----NIDLVF-------- 1263
            .||..|:.:.|||:.....|.:...|:|||.||....|::..:.|:     |:.:::        
 Frog   920 DRIIQLEEEHLKTLRRKDLELQSLSLQNKLEEKTWGQEKILLQQELRSFKENVFVIYAKLKRLLK 984

  Fly  1264 --QLRKDNDDLNGKLSDYNRI-------------------------EQAQSSLNGHGARREAEIR 1301
              |..|.::::..|:...::|                         :.|..:|..:......|.|
 Frog   985 HWQQCKGSEEVGNKVHQIDQINAHPDFSIHLDFRESDPDLEEVDEEDDAVFALTDYSQHSILESR 1049

  Fly  1302 ELKEQLQSTELQMKSEVATVRLRYEQQVKNLSGELTSMQRQCERFKKDRDAFKQMLEVAQKKIGD 1366
            :...|||:.||....:.||...|:                        ..|||.:|         
 Frog  1050 DSSPQLQTAELLQHQKRATENHRF------------------------LAAFKALL--------- 1081

  Fly  1367 LKANNTGRQSRGSMHSSDDDDKSKIAYLEQQIGHLEDQLVESRLESSKIKTELVSERSANEIKIS 1431
                              ||..|::|              |...|..:|:.:..::::..:::.:
 Frog  1082 ------------------DDFLSELA--------------EEVREKHEIQKQYTADKATWQVEGT 1114

  Fly  1432 EMQSKLNEFEEERVIGSGSTKLPGMKTKLELSWQKEREDQQRLLQETSTLARDLRQTLFEVERER 1496
            |::..|.:::|:|:..||.|....:|..:.|    |||:.::||.|:.:.|.|||:.|.:.|::.
 Frog  1115 ELKCLLQKYDEKRLRISGETCSIELKPSVIL----EREEHRKLLAESHSTAMDLRRQLQQSEKKW 1175

  Fly  1497 DKERLESKRKLDQIKRATEEEMEEGRKKIAELQCDLLELRD--------------------VHAK 1541
            .:||:|...:.|:.:|..|.:.:|.::.|.:||.::...|.                    :||.
 Frog  1176 SQERMELTDRYDKERRDWERQRKEFQRTIEQLQKEMSPRRTENFLSDQKDGSAGQFSPKAALHAS 1240

  Fly  1542 LRTSNEKLRRERE-RYEKELIKRRMEADGGDRKVGALLQTVDEL-VKIAPDLKI----------- 1593
            .|..........: :.|.:|:.:   ..|.||..|:....:|.| :..|.|:.|           
 Frog  1241 HRLGARSFSDSDDMQLEDQLVPK---LKGSDRCCGSENLFLDALSLDSADDIDIPQPHQLERDKF 1302

  Fly  1594 -----VGSGGSARSSSSSGY--------------DKN-------------LRPE----------- 1615
                 :..||..|..|.|..              |||             |.|:           
 Frog  1303 AAEEDLQKGGLQRVMSVSSMSEFHRLMESSPFLPDKNSDFAGDKDELTPPLSPDDLKYIEEFNKN 1367

  Fly  1616 ------------------QPNVRRSRSPSP----------TLSSSQITSVL-------------- 1638
                              :.|.|..:.||.          |.|.:..|:.|              
 Frog  1368 WDYSNVSQSDKVGICGENKENGRIQKDPSSETFQSSSWFLTTSVTMTTNTLTNPEHCLIPPPRSH 1432

  Fly  1639 -------ARLAEASEELRKFQRV----NEDEQERSRMRRSNLRRAASQENDPHGSTSSVASAAGS 1692
                   .|:.::...:|:|.:|    ||::::..|    ::..:|::...|....       |:
 Frog  1433 TVAEKMGVRVFQSPPVVRRFDKVAIASNEEKKQVDR----DMMFSATKATVPEAKN-------GA 1486

  Fly  1693 QRGGGRLSRNSSNNGSLIRKSLSLDHSIQRD--QNIWRQDDGSVSSMQSID---------SELGG 1746
            ....||.|       |.:.|..|..||::|.  ..:     |..||:.:::         .|:..
 Frog  1487 TEVFGRWS-------SDLNKHHSGFHSMERPVCSTV-----GYASSLHNLELSRNMSDDMKEVAN 1539

  Fly  1747 LVRDSSLDSRLDSRL------------SGGSTQSDIPRGPRKKKKGIMGKLRSLTKSSRNSESEI 1799
            .||.:.|.:.::|:.            :|..|...|..|.:.:      .|||:|.|....   :
 Frog  1540 SVRHAILTTSVESQFRDIACQTNGLKSTGTQTTQTISVGLQTE------TLRSITSSPHKC---L 1595

  Fly  1800 SIQGSDSDISVASDMRSSKKDLRGR--------LSGMFKRSGSASR--SESMER---AGSDQRPV 1851
            :.:|..:.||      |..:.||.|        :...|:||..:.:  |..:::   ..:||:..
 Frog  1596 TPKGGSTPIS------SPSRSLRSRQVAPAIEKVQAKFERSCCSPKYGSPKLQKKILPKTDQQMN 1654

  Fly  1852 AVTVVGHPDG---------PQPREPP-------------------PAN-SLTP---RP-IRSIPK 1883
            ..|.|....|         ...||.|                   |.| ..||   || .||...
 Frog  1655 RATGVNPQKGFNESAWARSTTTRESPVHTTINDGLSSLFNIIDHSPVNCDHTPKLSRPSSRSRSA 1719

  Fly  1884 PPSAGAPTTP 1893
            .|.:...|||
 Frog  1720 EPRSELGTTP 1729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18304NP_001260170.1 SMC_prok_B <354..1093 CDD:274008 177/773 (23%)
SMC_prok_B 831..>1544 CDD:274008 169/820 (21%)
PHA03307 1657..>1901 CDD:223039 61/306 (20%)
mtcl1XP_031759528.1 PHA03307 19..>226 CDD:223039 51/240 (21%)
SMC_prok_B <246..552 CDD:274008 99/413 (24%)
PRK03918 348..996 CDD:235175 172/787 (22%)
SOGA 397..491 CDD:463264 37/187 (20%)
SOGA 526..615 CDD:463264 25/102 (25%)
YhaN <892..>1210 CDD:443752 80/390 (21%)
DUF4482 1162..1285 CDD:464333 27/125 (22%)

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