Protein Alignment Sec61alpha and sec6102

DIOPT Version :10

• Sequence 1: NP_609034.1
• Gene: Sec61alpha / 33905
• FlyBaseID: FBgn0086357
• Length: 476
• Species: Drosophila melanogaster
• Sequence 2: NP_595983.2
• Gene: sec6102 / 2540769
• PomBaseID: SPBC19G7.17
• Length: 475
• Species: Schizosaccharomyces pombe
• Alignment Length: 476
• Identity: 151/476 - (31%)
• Similarity: 261/476 - (54%)
• Gaps: 14/476 - (2%)

  Fly     2 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIR 66
            |.:|:..|||..|:|||:..|:..::..||:.|.|..:.::.:...||::|...:|:.||....|
pombe     3 GARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLDPINNFR 67

  Fly    67 VILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAQKLFGMVITIGQAIV 130
            |:..|:...||..|::||..|..::|:||..|.|.|. :...||.||..|||:...::.:..|:.
pombe    68 VLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVVSALLYLILAVT 132

  Fly   131 YVMTGMYGDPSEIGAGVCLLIIIQLFAAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKA 195
            ||.:|.||..|::|....:::|:|:|..|::.:.|.|:::||:|||||..|.:.::|...|:|..
pombe   133 YVSSGYYGSFSDLGIFRFIMLILQIFLPGIVCIYLCEIIEKGHGLGSGPVLLLGSHILGNIMWDV 197

  Fly   196 FS----PTTVTTGRGTEFEGAVIAL-FHLMATRNDKVRALREAFYRQNLPNLMNLLATVLVFAVV 255
            .|    |  |.....::::||::.. |:|.:.:| |..:||...:|....:.:..|..:.|||..
pombe   198 LSLHRYP--VNESGDSQYQGALVGFAFNLFSFKN-KFSSLRSILFRSEGLSFVQFLVCIAVFATF 259

  Fly   256 IYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFINL 320
            :|....|:|:||:|:|.||...::|:||.|||.||:|...:::|:|.|.:..|......:....|
pombe   260 MYTLNIRIDVPIRSSRVRGVRQNFPLKLLYTSVIPLIYFYSILSHLLVFAYALYSLCPNSLITRL 324

  Fly   321 LGVWADVGGGGPARSYPIGGLCYYLSPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGS 385
            |..::.:......:...:|||.|:|.||..:...|..|:|.::|.:.::....:||..|::.:..
pombe   325 LVQYSPIDTFAEHKLQLVGGLVYFLYPPLGLSEALLHPVHTVIYTITLICITIYFSLLWMNATAG 389

  Fly   386 SAKDVAKQLKEQHMVMRGHRENSMIHELNRYIPTAAAFGGLCIGALSVMADFLGAIGS--GTGIL 448
            ..:||....||..:|:.|:||.:|:.||.:.||.||......:..|||:|   |...|  |.|:|
pombe   390 GPRDVLLFFKENQLVIAGYREATMLKELEKIIPIAAKLSAFFVSILSVIA---GIFASTFGVGVL 451

  Fly   449 LAVTIIYQYFEIFVKEQSEMG 469
            :|..::|..||:.|...:.:|
pombe   452 IASALVYASFEMIVGANTSLG 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sec61alpha	NP_609034.1	PTZ00219	1..469	CDD:185519	150/474 (32%)
sec6102	NP_595983.2	PTZ00219	3..465	CDD:185519	149/467 (32%)