DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13996 and Samd15

DIOPT Version :10

Sequence 1:NP_608980.1 Gene:CG13996 / 33842 FlyBaseID:FBgn0031763 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001382553.1 Gene:Samd15 / 681908 RGDID:1589368 Length:574 Species:Rattus norvegicus


Alignment Length:249 Identity:51/249 - (20%)
Similarity:80/249 - (32%) Gaps:102/249 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PHSASGMDSPDICEPPQDEQEFCFRYPSYMFPDVE--YDKEDVPLPFK----------------- 62
            |...:.:|.|:..|..|..:: ..:.||...|..|  :.|||.|.|.|                 
  Rat   274 PPQTTDLDIPEKSELEQTIEK-SLKLPSEPKPGEEGQFPKEDRPGPSKLKYPIGKDDLIFSEYQK 337

  Fly    63 ----------------ASP---------------------DSLFNLCAAVVDSQARTEV------ 84
                            .||                     |.:..|..||.|.:|.||:      
  Rat   338 KLSEKKSTKSKNDYVVGSPRESVESAGSVYETQEFLRDLQDDMNELFTAVPDLEASTELRDSLVF 402

  Fly    85 ------------------------FKWSINDVTDWLRNFGYPEYEQTFRENYIDGHKLLNLDAVA 125
                                    ..||...|.:|:.:.|||:|::.|.||:|.|.||::::...
  Rat   403 PQDVDILGGKESQINPSLRPQFEHLTWSPERVAEWISDLGYPQYKECFTENFISGQKLIHVNCSN 467

  Fly   126 LVALNVRNFEHIRHLGRGIRAL---------------YRKELQTATETKQQSEV 164
            |..:.:.:||.::.:...:|.|               ||..:....|.|..|.|
  Rat   468 LPQMGITDFEDMKAISYHVRVLLGIEEPLFSRSICLPYRDNIGLFLERKGHSGV 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13996NP_608980.1 SAM_superfamily 85..151 CDD:472832 22/80 (28%)
Samd15NP_001382553.1 SAM_Samd14 427..493 CDD:188929 20/65 (31%)

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