DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and Eif4a3

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001093628.1 Gene:Eif4a3 / 688288 RGDID:1591139 Length:411 Species:Rattus norvegicus


Alignment Length:377 Identity:263/377 - (69%)
Similarity:321/377 - (85%) Gaps:0/377 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQ 91
            :|...||.|.|||:||||||.||||||||||||||...::|||||||:||||||||||||::||.
  Rat    35 DVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQC 99

  Fly    92 IDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTP 156
            :|..:||.||||||||||||.|||:.::|||:||.|..|||||||||.||.|.|:.|.|||.|||
  Rat   100 LDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164

  Fly   157 GRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVS 221
            |||:|||.|:.|||:.||:.|||||||||::|||:||.||::.|||..||:|:|||:|.::||::
  Rat   165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMT 229

  Fly   222 RCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLT 286
            ..||.||:.||||::||||||||||:|.|::|.||..|||||||||:|||:||||||:||||.||
  Rat   230 NKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLT 294

  Fly   287 QEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRE 351
            ::|...|||||:|||||.|::||.|||:||||:|||||:||:.|||:||.||||:||||||:|||
  Rat   295 EKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 359

  Fly   352 NYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
            .|||||||.||:|||||||||:.:||.|||:||||:|.|.|:|||.|:||||
  Rat   360 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 261/375 (70%)
Eif4a3NP_001093628.1 DEAD-like_helicase_N 35..411 CDD:475120 261/375 (70%)
Q motif 38..66 21/27 (78%)
DEAD box. /evidence=ECO:0000305 187..190 2/2 (100%)

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