DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and livF

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_417911.4 Gene:livF / 947961 ECOCYCID:EG10536 Length:237 Species:Escherichia coli


Alignment Length:244 Identity:67/244 - (27%)
Similarity:123/244 - (50%) Gaps:38/244 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YYGSKSNPKI-VLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVV--------L 67
            :||     || .|:::::::.:|.|..|:||:|.||||||..:.|..|...|.:|.        .
E. coli    14 HYG-----KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQ 73

  Fly    68 GAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETI----FYFGRIYGLTDERIREKFKLLKELL- 127
            .||       :....|..:|:...:...|||:|.:    |:..|      ::.:|:.|.:.||. 
E. coli    74 TAK-------IMREAVAIVPEGRRVFSRMTVEENLAMGGFFAER------DQFQERIKWVYELFP 125

  Fly   128 QLPPAR-QMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLA 191
            :|...| |.....|||:|:.|:...|::.:|.||:||||::||.|::.::|:| .:|..|...:.
E. coli   126 RLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFD-TIEQLREQGMT 189

  Fly   192 VIITTHYIEEA-KQANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFL 239
            :.:......:| |.|:...::.||.::..||...::   ..:::..|:|
E. coli   190 IFLVEQNANQALKLADRGYVLENGHVVLSDTGDALL---ANEAVRSAYL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 67/244 (27%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
livFNP_417911.4 livF 1..237 CDD:183231 67/244 (27%)
Blue background indicates that the domain is not in the aligned region.

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