DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and ybhR

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_415313.1 Gene:ybhR / 945403 ECOCYCID:G6409 Length:368 Species:Escherichia coli


Alignment Length:373 Identity:75/373 - (20%)
Similarity:146/373 - (39%) Gaps:72/373 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 RVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFDENL 370
            |:..|:.|....|.|:|.....::|..:||:..|..|.....||..|.:|               
E. coli     4 RLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIY--------------- 53

  Fly   371 VTVYKDSDN-ESCLFNKLSCRYIRVLGDDVATRKYYASEADALNDAKRATTVGYLHFAQNFSDSI 434
                 |.|| |..:  :|:.|:.|..............|.....|.::|..:  :.|..:||..:
E. coli    54 -----DEDNGEHSV--ELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLL--VRFPADFSRKL 109

  Fly   435 -------LSVMEDGIHSSDGAVDHAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVST 492
                   |.::.||.:|:..               |..|.::|:.:::.....:....|..|...
E. coli   110 DTFQTAPLQLILDGRNSNSA---------------QIAANYLQQIVKNYQQELLEGKPKPNNSEL 159

  Fly   493 AIVDLPVQFQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDGIWDRTLLAGVSA 557
            .:.:         :.:.:::::.:..|.::..:......::|:.....||..|..|:.|::.::.
E. coli   160 VVRN---------WYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTT 215

  Fly   558 TEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLIGLLTLTAFCGML-------FGLF 615
            .::.....:..||:...|: .:::.||:.  .|.    ....|.|.|..|..::       |||.
E. coli   216 WQIFIGKAVPALIVATFQA-TIVLAIGIW--AYQ----IPFAGSLALFYFTMVIYGLSLVGFGLL 273

  Fly   616 ISVFCKSHTEANFVATGAF-YPMIILCGLLWPLESMPQFLQDLVMVLP 662
            ||..|.:..:| |:....| .|.|:|.|.:.|:|:||.:||:|..:.|
E. coli   274 ISSLCSTQQQA-FIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINP 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746
ABC2_membrane_3 322..702 CDD:463674 70/357 (20%)
YadH 513..710 CDD:440604 38/158 (24%)
ybhRNP_415313.1 NatB 2..>298 CDD:441274 65/349 (19%)
YadH 171..366 CDD:440604 38/158 (24%)
Blue background indicates that the domain is not in the aligned region.

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