DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11147 and yadG

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_414669.1 Gene:yadG / 944833 ECOCYCID:EG12320 Length:308 Species:Escherichia coli


Alignment Length:328 Identity:93/328 - (28%)
Similarity:149/328 - (45%) Gaps:69/328 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLG---------AKPGEPGSGV 78
            |..:::.|..|..|.|||.:|.||:|.:..|........|.|.|.|         ||        
E. coli    21 LRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAK-------- 77

  Fly    79 PGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTDER----IREKFKLLKELLQLPPARQMIKQC 139
              .::|.:|||.......||::.:......||:  ||    ||.: |.||:|.......:..:..
E. coli    78 --RQLGLVPQEFNFNPFETVQQIVVNQAGYYGV--ERKEAYIRSE-KYLKQLDLWGKRNERARML 137

  Fly   140 SGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSK-LAVIITTHYIEEAK 203
            |||.:|||..|.|::|:|:||||||||.|:|..||..:|.||.:.  |.| ..:|:||||:|||:
E. coli   138 SGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDL--NDKGTTIILTTHYLEEAE 200

  Fly   204 QANC--IGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNEDELAQIMDHNKNQALPAA 266
            .. |  ||::::|.|:...:...::.|..:::    |::         :||           |.:
E. coli   201 ML-CRNIGIIQHGELVENTSMKALLAKLKSET----FIL---------DLA-----------PKS 240

  Fly   267 VLPPEVIDTHEPNMPEKQPIPFEEPLNENRKKIFFT--TKGRVKALMTKN--------FVQLFRQ 321
            .||.  :|.::..:.:...:.. |.|.|......||  ::..::.|..:|        ||.|..:
E. coli   241 PLPK--LDGYQYRLVDTATLEV-EVLREQGINSVFTQLSEQGIQVLSMRNKANRLEELFVSLVNE 302

  Fly   322 PSG 324
            ..|
E. coli   303 KQG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 76/237 (32%)
ABC2_membrane_3 322..702 CDD:463674 1/3 (33%)
YadH 513..710 CDD:440604
yadGNP_414669.1 CcmA 5..233 CDD:440746 75/231 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.