DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and ABCA10

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_001318860.1 Gene:ABCA10 / 836296 AraportID:AT5G61740 Length:909 Species:Arabidopsis thaliana


Alignment Length:314 Identity:82/314 - (26%)
Similarity:153/314 - (48%) Gaps:42/314 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YYGSKSN-PKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPG 75
            |.||..| ||:.:..|.::|..|..:|:||.:|.|||:.::.:.|..:...|..:|.|....:..
plant   596 YPGSDGNPPKLAVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICKDM 660

  Fly    76 SGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTD----ERIREKFKLLKELLQLPPARQMI 136
            :.|..| :|..||...|...:|.:|.:.::||:..:..    :.:.|..|.: .|.....|.:..
plant   661 NKVYTS-MGVCPQHDLLWGTLTGREHLLFYGRLKNIKGSALMQAVEESLKSV-SLFDGGVADKPA 723

  Fly   137 KQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIEE 201
            .:.|||.:||||.|.::|.:|:::.:|||:.||||..|:.:|..:....:|:  |:|:|||.:||
plant   724 GKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWTVIQRAKQNT--AIILTTHSMEE 786

  Fly   202 AK-QANCIGLMRNGVLLAEDTPTNIMIKFG-------TQSIEDAFLILSQRQGNEDELAQIMDHN 258
            |: ..:.:|:..:|.|.....|..:..::|       |.|:|           :|:::.:::.| 
plant   787 AEFLCDRLGIFVDGGLQCVGNPKELKGRYGGSYVFTMTTSVE-----------HEEKVERMVKH- 839

  Fly   259 KNQALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNENRKKIFFTTKGRVKALMT 312
                     :.|.....:.....:|..||.:|.:..:   :||..: :||:..|
plant   840 ---------ISPNSKRVYHLAGTQKFEIPKQEVMIAD---VFFMVE-KVKSKFT 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 70/245 (29%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
ABCA10NP_001318860.1 rim_protein <326..>904 CDD:130324 82/314 (26%)
ABC_subfamily_A 591..812 CDD:213230 66/219 (30%)
Blue background indicates that the domain is not in the aligned region.

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