DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11147 and ABCB2

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_194326.2 Gene:ABCB2 / 828702 AraportID:AT4G25960 Length:1273 Species:Arabidopsis thaliana


Alignment Length:661 Identity:129/661 - (19%)
Similarity:241/661 - (36%) Gaps:190/661 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SNPKIVL-NQLNMNVMRGSIYGLLGASGCGKTTLLSC-------IVGQRRLNGGEVVVLGAKPGE 73
            |.|.:|: ::||:.:..|.|..|:|.||.||:|::|.       |.|...|:|..:..|..|   
plant   412 SRPDVVIFDRLNLAIPAGKIVALVGGSGSGKSTVISLIERFYEPISGAVLLDGNNISELDIK--- 473

  Fly    74 PGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTD---ERIREKFKL---------LKEL 126
               .:.| ::|.:.||.||. ..|::|.|     :||..|   |.|....||         |.|.
plant   474 ---WLRG-QIGLVNQEPALF-ATTIRENI-----LYGKDDATAEEITRAAKLSEAISFINNLPEG 528

  Fly   127 LQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFL--VETTRNSK 189
            .:.....:.| |.||||::|::.:.|::.:|.:|:|||.|..||....:.:.:.|  |...|.: 
plant   529 FETQVGERGI-QLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTT- 591

  Fly   190 LAVIITTHYIEEAKQANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNEDELAQI 254
               ::..|.:...:.|:.|.::..|.:          ::||...     .::|...|....|.::
plant   592 ---VVVAHRLSTVRNADIIAVVHEGKI----------VEFGNHE-----NLISNPDGAYSSLLRL 638

  Fly   255 MDH---NKNQALPAAVLPP-------EVIDTHEPNMPEKQPIPFEEPLNENRK-KIFFTTKGRVK 308
            .:.   .:|.:|...:..|       |:..|......|::.:...:..:.::| |:   |.||:.
plant   639 QETASLQRNPSLNRTLSRPHSIKYSRELSRTRSSFCSERESVTRPDGADPSKKVKV---TVGRLY 700

  Fly   309 ALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFDENLVTV 373
            :::..::              ::.:....|.::|..:.|. ..:||            .:.||:.
plant   701 SMIRPDW--------------MYGVCGTICAFIAGSQMPL-FALGV------------SQALVSY 738

  Fly   374 YKDSDNESCLFNKLSCRYIRVLGDDVATRKYYASEADALNDAKRATTVGYLHFAQNFSDSILSVM 438
            |...|.......|::..:...   .|.|...|..|...........|   |...:|...:||.  
plant   739 YSGWDETQKEIKKIAILFCCA---SVITLIVYTIEHICFGTMGERLT---LRVRENMFRAILK-- 795

  Fly   439 EDGIHSSDGAVDHAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIVDLPVQFQE 503
                 :..|..|      .:|.|...:|..::..     :|.::::|.|                
plant   796 -----NEIGWFD------EVDNTSSMLASRLESD-----ATLLKTIVVD---------------- 828

  Fly   504 PIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDGIWDRTLLAGVSATEMLWAHLLTQ 568
                .:.|..|..   |:|:|. |.:|.::.            |..||:...:...::..|:..:
plant   829 ----RSTILLQNL---GLVVTS-FIIAFILN------------WRLTLVVLATYPLVISGHISEK 873

  Fly   569 LIIMALQSFEVIMYIGLVFDTYNNGDT---TTLIGLLTLTAFC---------------------- 608
            |.:..        |.|.:...|...:.   .::..:.|:.|||                      
plant   874 LFMQG--------YGGDLNKAYLKANMLAGESVSNIRTVAAFCAEEKILELYSRELLEPSKSSFR 930

  Fly   609 -GMLFGLFISV 618
             |.:.|||..|
plant   931 RGQIAGLFYGV 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 65/249 (26%)
ABC2_membrane_3 322..702 CDD:463674 51/323 (16%)
YadH 513..710 CDD:440604 23/132 (17%)
ABCB2NP_194326.2 MdlB 55..643 CDD:440747 67/263 (25%)
MdlB 689..1272 CDD:440747 56/351 (16%)

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