Protein Alignment CG11147 and abca12

DIOPT Version :10

• Sequence 1: NP_608954.1
• Gene: CG11147 / 33803
• FlyBaseID: FBgn0031734
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: XP_686632.6
• Gene: abca12 / 558335
• ZFINID: ZDB-GENE-030131-9790
• Length: 5913
• Species: Danio rerio
• Alignment Length: 829
• Identity: 160/829 - (19%)
• Similarity: 271/829 - (32%)
• Gaps: 286/829 - (34%)

  Fly    11 KYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPG 75
            |.||.::    .::.||::...|.:..|||.:|.||||.:|.:.|......|.:.|.|.   :..
Zfish  4673 KTYGKRN----AVDNLNLSFYEGHVTSLLGHNGAGKTTTMSLLTGLFAPTVGTIEVYGM---DMQ 4730

  Fly    76 SGVPGSR--VGFMPQEIALVEEMTVKETIFYFGRIYG--LTDERIREK-FKLLKELLQLPPARQM 135
            ..:...|  :|...|...|.:.:|.||.:..:.:|..  .|.:.::|: .|:|.|........:.
Zfish  4731 MFIDDVRKEMGVCMQYDVLFDHLTTKEHLLLYAQIKAPHWTKQEVKEQVHKILMETDMHAHRHKR 4795

  Fly   136 IKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIE 200
            :...|||.:|:||.:.|.|....|::|||||.|:||..|..|||.:::  ...:..:|::||:::
Zfish  4796 VGTLSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSIWDIIIQ--HKQERTIILSTHHLD 4858

  Fly   201 EAK-QANCIGLMRNGVLLAEDTPTNIMIKFG-------TQSIEDAFLILSQRQGNEDELAQIMDH 257
            ||: .::.|..:..|.|....:|..:..|..       |:.:|.|            :..:..|:
Zfish  4859 EAEVLSDRIAFLERGGLKCCGSPFYLKDKLAKGYNLTLTKKVETA------------DSKEKFDY 4911

  Fly   258 NKNQALPAAVLPPEVIDTHEPNMPEKQ--------PIPFEEP------------LNENRKKIFFT 302
            .|.:         :.|.:|.|:..:|.        .:|...|            |::|..|:...
Zfish  4912 EKLR---------DFIHSHLPDARQKDREMGDLVYALPPYTPQNASEYHSLLNSLDQNLDKLHLG 4967

  Fly   303 TKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFD 367
            ..|.....:.:.|:||.|.                             ::.....|..:..|...
Zfish  4968 CYGISDTTLEEVFLQLTRD-----------------------------DLEPKESETWSVSESVI 5003

  Fly   368 ENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVATRKYYASEADAL--NDAKRATTVGY------- 423
            ||.:...:||.:|.|                   ...|..|..:|  |...|...:|.
Zfish  5004 ENDMFASRDSLSEDC-------------------NSMYLGEKASLTGNSTVRGFALGVQRVIAML 5049

  Fly   424 ---LHFAQN-----FSDSILSVM----EDGIHSSDGAVDH---AELSIHIDMTDQQVAYFMQR-- 471
               :|.::.     ||..:|.|:    ..|:.|....:.|   ..||..:...|:|.|:|..:
Zfish  5050 LKRVHHSRRDWKGLFSQVLLPVLFVIAAMGLGSIKSDLQHFPEIVLSPALYHVDEQYAFFSNQNP 5114

  Fly   472 ---KLRDKFSTF--------------------------------MRSVVKDCNVSTAIVDLPVQF 501
               :|.|...::                                ..:....|..|..:...|.|.
Zfish  5115 NTSRLVDTMMSYPGIDHVCMTDPTDPVCKGRPSTGSQTWVSGGNSSATFTTCKCSNQVQSCPAQG 5179

  Fly   502 QEP----------IFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDGIWD-------- 548
            .:|          ::..|.:..:.|              .|.||..||.:|..| |:
Zfish  5180 YDPPRKRCPSSQIVYNLTGVNIENY--------------LLATANNFIRDRYGG-WEFGKPLPID 5229

  Fly   549 -----------RTLLAGVSATEMLW----AHLLTQLIIMALQSF--------------------- 577
                       |||       ..:|    .|......:.:|.:|
Zfish  5230 LKMDMLDVPANRTL-------SKVWYNSEGHHSMPAYLNSLNNFFLRSSLPPEKRYQYAISISSH 5287

  Fly   578 --------EVIMYIGLVFDTYNNGDTTTLIGLLTLTAFCGMLFGLFISVFCKSHT---------- 624
                    |.:|..|||         :.|:.|..||.:..|.....|....:.||
Zfish  5288 PYPGQVQDEDLMVGGLV---------SILVALCVLTGYSIMTASFVIYEVQEHHTGSKRLQQISG 5343

  Fly   625 --EANFVATGAFYPMIILCGLLWPLESMPQFLQDLVMVLPFTIPSISAR 671
              |..:.....||.|        .|..:|..| .:|||..|.:|:.:.|
Zfish  5344 ISEPFYWIINFFYDM--------ALYMIPVVL-SVVMVAAFQLPAFTER 5383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11147	NP_608954.1	CcmA	4..245	CDD:440746	66/246 (27%)
		ABC2_membrane_3	322..702	CDD:463674	78/485 (16%)
		YadH	513..710	CDD:440604	42/223 (19%)
abca12	XP_686632.6	rim_protein	4..>93	CDD:130324
		COG5412	<2412..2813	CDD:444167
		rim_protein	4105..5897	CDD:130324	160/829 (19%)