Protein Alignment CG11147 and abca4

DIOPT Version :10

• Sequence 1: NP_608954.1
• Gene: CG11147 / 33803
• FlyBaseID: FBgn0031734
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_001011033.1
• Gene: abca4 / 496442
• XenbaseID: XB-GENE-1000810
• Length: 2359
• Species: Xenopus tropicalis
• Alignment Length: 316
• Identity: 84/316 - (26%)
• Similarity: 143/316 - (45%)
• Gaps: 56/316 - (17%)

  Fly     5 EVRNGYKYYGSKSNP--------------------------KIVLNQLNMNVMRGSIYGLLGASG 43
            ::::|:.|.|   ||                          |..::::|:....|.|...||.:|
 Frog   973 DMKDGFTYIG---NPFFEPEPPGMVPGVYIQDLVKVYENTYKPAVDRMNITFYEGQITAFLGHNG 1034

  Fly    44 CGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRI 108
            .||||.||.|.|......|.|.|.|.........:..| :|..||...|...:||:|.|.::.::
 Frog  1035 AGKTTTLSIITGLFPPTSGTVWVRGRDIQTHMDSIRQS-LGMCPQHNILFRHLTVEEHILFYAQL 1098

  Fly   109 YGLTDERIREKFKLLKELLQLPPAR-QMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPM 172
            .|.:.::...:.:::.|.:.:|..| ...:..|||.||:||.|.|.:.:.::::|||||.|:||.
 Frog  1099 KGKSRKQAERQAEVMLEDMGIPHKRNDEAQNLSGGMQRKLSVALAFVGESKVVVLDEPTSGVDPY 1163

  Fly   173 LREKIWDFLVETTRNSKLAVIITTHYIEEAK-QANCIGLMRNGVLLAEDTPTNIMIKFGTQSIED 236
            .|..|||.|::  ..|...:|::||:::||. ..:.|.::..|.|....:|..:...|||    .
 Frog  1164 SRRSIWDLLLK--YRSGRTIILSTHHMDEADLLGDRIAIVSQGKLFCSGSPLFLKNCFGT----G 1222

  Fly   237 AFLILSQRQGNEDELAQIMDHNKNQ--------ALPAAVLPPEVIDTHEPNMPEKQ 284
            .:|.|.:|..|      |.|..|..        :.|.:...|:|    :.|:.|::
 Frog  1223 FYLTLVRRMRN------IKDTGKKDSASCQSDCSCPCSSCTPKV----KENLLEQE 1268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11147	NP_608954.1	CcmA	4..245	CDD:440746	74/267 (28%)
		ABC2_membrane_3	322..702	CDD:463674
		YadH	513..710	CDD:440604
abca4	NP_001011033.1	rim_protein	1..2347	CDD:130324	84/316 (27%)