Protein Alignment CG11147 and Abca16

DIOPT Version :10

• Sequence 1: NP_608954.1
• Gene: CG11147 / 33803
• FlyBaseID: FBgn0031734
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: XP_038957107.1
• Gene: Abca16 / 293444
• RGDID: 1563534
• Length: 1680
• Species: Rattus norvegicus
• Alignment Length: 892
• Identity: 185/892 - (20%)
• Similarity: 312/892 - (34%)
• Gaps: 291/892 - (32%)

  Fly     2 AAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVV 66
            |.:::::.:|.:  |:.|.|  |.|::|:..|.:..|||.:|.||||.||.:.|:.....||..:
  Rat   514 AGIQIKHLHKEF--KTKPAI--NNLSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYI 574

  Fly    67 LGAKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYG-------LTDERIREKFKLLK 124
            .|....:..:.: ...:||.||...|.:::|:.|.:|::..|.|       :...|:...|.|.:
  Rat   575 NGYNISDNMAEI-RKDLGFCPQHDLLFDDLTLSEHLFFYCMIKGHPQNINCVEINRMLSVFNLQE 638

  Fly   125 ELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSK 189
            ....|..:      .|||.:|:||...|::...:::|||||:.|:|||.|...||.|....:|.
  Rat   639 NYHTLSGS------VSGGVRRKLSIILALMGGSKVVILDEPSSGMDPMSRRATWDILQHYKQNR- 696

  Fly   190 LAVIITTHYIEEA------------------------KQA------------------NCIGLMR 212
             .:::||||::||                        ||.                  |.|.:::
  Rat   697 -TILLTTHYMDEADVLGDRIAIMVRGTLHCCGSSVFLKQIYGAGYHIVLEKEPYCDVDNIIAMIQ 760

  Fly   213 N---GVLLAEDTPTN---IMIKFGTQSIEDAFLILSQRQ-----GNEDELAQIMDH-----NKNQ 261
            .   |.:|..|....   |:.|......|..|..|..||     .|.......|:.     ||..
  Rat   761 QHVPGSMLENDIGNELSFILPKKYVSRFETLFTELEMRQKALGIANFGASITTMEEVFLKVNKLA 825

  Fly   262 ALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNEN-----RKKIFFTTKGRVKALMTKNF---VQL 318
            |      |...|.|.:|.....:.:..:|..|.|     .|.||    ..::.:.|..|   |.|
  Rat   826 A------PQRSIQTIQPYYLTYKKMRQDEQQNVNILRNYNKPIF----PYLREIATVKFNTGVPL 880

  Fly   319 FRQPS---------------GIIFMLLFPIIQLTCFYLA------------------IGKTPT-- 348
            :||..               .::|:.:..::.:|.:.|.                  .|||..
  Rat   881 YRQQFYSMFIKRALFIGRNWKLMFLQIIVVLVVTTYLLLSLHLDDNDIPERELNLSHYGKTIVPY 945

  Fly   349 --------------NLEIGVYS---------GEVENY----GEC-------------FDENLVTV 373
                          ||:|.:.|         |::.||    .:|             .::.::|:
  Rat   946 SISGNSDLALNLIKNLKIFLKSKNQSLKKIKGDMNNYILENKDCRTFCIIALSIKVERNKTVLTI 1010

  Fly   374 YKDSDN-----------ESCLFNKLSCRYIRVLGDDVATRK-----YYASEADALNDAKRATTVG 422
            :.:::.           ::.||..||.|...:    .|..|     :|.|....:|.
  Rat  1011 FFNNEAYHSPAISLSILDNILFMTLSGRDASI----TAFNKPQPLPHYGSNTVPVNG-------- 1063

  Fly   423 YLHFAQNFSDSILSVMEDGIHSSDGAVDHAELSIHID-MTDQQV-AYFMQRKLRDKFSTF----- 480
             |...|..:..|..|:  |..|.....:....:.||. :|...| .|::...|.|....|
  Rat  1064 -LQIVQCLAFGISVVV--GSFSIQTVTERISQAKHIQFLTGVCVLTYWLSALLCDLIFFFFACCV 1125

  Fly   481 MRSVVKDCNVSTAIVD-----------------LPVQFQEPIFGSTDIEFQQYCAPGVVMTMVFF 528
            :..:.:.|.:...:|.                 :|:.:    .||  ..|....|..:.:|:..:
  Rat  1126 LLGIFRFCQLEAFVVHYNFLDTILIFMLYGWCVVPLTY----LGS--FLFNSSTAAYIKITLFNY 1184

  Fly   529 LATLMTAAVFISERMDGIWDRTLLAGVSATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNG 593
            .:|:.:..::...:..|.....|:           |:|.:.|:|||.|:.:.|.|...||.|.
  Rat  1185 FSTMFSIIIYTIVQFYGEDFPALI-----------HILIKTILMALPSYNLAMSISKYFDDYE-- 1236

  Fly   594 DTTTLIGLLTLTAFCGMLFGLFISVF--CK------------SHTEANFVATGAFYPMIILCGLL 644
                      :...|...|.   |::  |.            .|....|:.|.|...::.|. ||
  Rat  1237 ----------VKRLCAREFR---SIYMDCSEPFIQNNVYGFGEHGIGKFLITLATMGLVFLL-LL 1287

  Fly   645 WPLESMPQFLQDLVMVLPFTIPSISARNV-------IEKGWSITHEK 684
            ..|||:...|::.|.           |||       |.||....|.|
  Rat  1288 LSLESVSSSLKNFVF-----------RNVLFYFYNKIRKGRHGVHSK 1323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11147	NP_608954.1	CcmA	4..245	CDD:440746	75/295 (25%)
		ABC2_membrane_3	322..702	CDD:463674	86/499 (17%)
		YadH	513..710	CDD:440604	42/193 (22%)
Abca16	XP_038957107.1	rim_protein	<163..1664	CDD:130324	185/892 (21%)