DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and ABCA3

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_001080.2 Gene:ABCA3 / 21 HGNCID:33 Length:1704 Species:Homo sapiens


Alignment Length:266 Identity:83/266 - (31%)
Similarity:141/266 - (53%) Gaps:13/266 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPGSGVPGSRV 83
            |.:.:::|::.|.:|..:||||.:|.||||....:.|:..|..|:..|.|.:... ..|....|:
Human  1395 PLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFVGGHRISS-DVGKVRQRI 1458

  Fly    84 GFMPQEIALVEEMTVKETIFYFGRIYGLTDERIREKFK-LLKELLQLPPARQMIKQCSGGQQRRL 147
            |:.||..||::.||.:|.:..:.|:.|:.:..|....: .|:.||..|.|.::::..|||.:|:|
Human  1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTLRGLLLEPHANKLVRTYSGGNKRKL 1523

  Fly   148 SFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIEEAKQANC--IGL 210
            |...|:|.:|.::.||||:.|:||:.|..:|| .|...|.|..|:|||:|.:||. :|.|  :.:
Human  1524 STGIALIGEPAVIFLDEPSTGMDPVARRLLWD-TVARARESGKAIIITSHSMEEC-EALCTRLAI 1586

  Fly   211 MRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNEDELAQIMDHNKNQALPAAVLPPE---V 272
            |..|......:|.::..|||:.....|.:   |.:|.::.|.:.... .:...|.:||..|   :
Human  1587 MVQGQFKCLGSPQHLKSKFGSGYSLRAKV---QSEGQQEALEEFKAF-VDLTFPGSVLEDEHQGM 1647

  Fly   273 IDTHEP 278
            :..|.|
Human  1648 VHYHLP 1653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 75/228 (33%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
ABCA3NP_001080.2 rim_protein 1..>43 CDD:130324
rim_protein <131..1699 CDD:130324 83/266 (31%)
Blue background indicates that the domain is not in the aligned region.

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