DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and Abcb4

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_032856.2 Gene:Abcb4 / 18670 MGIID:97569 Length:1276 Species:Mus musculus


Alignment Length:774 Identity:155/774 - (20%)
Similarity:282/774 - (36%) Gaps:224/774 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPGSG 77
            |.|::|.|| |..||:.|..|....|:|.|||||:|.:..:  ||..:..|     .|....|..
Mouse   400 YPSRANIKI-LKGLNLKVKSGQTVALVGNSGCGKSTTVQLL--QRLYDPTE-----GKISIDGQD 456

  Fly    78 VPGSRVGFMPQEIALVEE------MTVKETIFYFGRIYGLTDERIREKFKLLKE------LLQLP 130
            :....|..:.:.|.:|.:      .|:.|.|     .||..:..:.|..|.:||      :::||
Mouse   457 IRNFNVRCLREIIGVVSQEPVLFSTTIAENI-----RYGRGNVTMDEIEKAVKEANAYDFIMKLP 516

  Fly   131 PARQMI-----KQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKL 190
            .....:     .|.||||::|::.|.|::.:|::|:|||.|..||.....:: ...::..|..:.
Mouse   517 QKFDTLVGDRGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEV-QAALDKAREGRT 580

  Fly   191 AVIITTHYIEEAKQANCIGLMRNGVLLAEDTPTNIMIK------------FGTQSIEDAFLI-LS 242
            .::| .|.:...:.|:.|....:||::.:.:.:.:|.|            .|:|.:.:.|.: ||
Mouse   581 TIVI-AHRLSTIRNADVIAGFEDGVIVEQGSHSELMKKEGIYFRLVNMQTAGSQILSEEFEVELS 644

  Fly   243 QRQGNEDEL-----AQIMDHNKNQALPA--------------AVLPP----EVIDTHEPNMP--- 281
            ..:...|..     |:|..::..::|.:              |.:||    :|:..::...|   
Mouse   645 DEKAAGDVAPNGWKARIFRNSTKKSLKSPHQNRLDEETNELDANVPPVSFLKVLKLNKTEWPYFV 709

  Fly   282 ----------EKQPI-------------PFEEPLNENRKKI------------FFT------TKG 305
                      ..||.             |.::.:.:.:..:            |||      |.|
Mouse   710 VGTVCAIANGALQPAFSIILSEMIAIFGPGDDAVKQQKCNMFSLVFLGLGVLSFFTFFLQGFTFG 774

  Fly   306 RVKALMTKN-----FVQLFRQP------------------------------------------- 322
            :...::|..     |..:.||.                                           
Mouse   775 KAGEILTTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATDAAQVQGATGTRLALIAQNTANL 839

  Fly   323 -SGIIFMLLFPIIQLTCFYLAIGKTP-----TNLEIGVYSG-------EVENYGECFDE------ 368
             :|||...::. .|||...|::  .|     ..:|:.:.:|       |:|..|:...|      
Mouse   840 GTGIIISFIYG-WQLTLLLLSV--VPFIAVAGIVEMKMLAGNAKRDKKEMEAAGKIATEAIENIR 901

  Fly   369 NLVTVYKDSDNESCLFNKL------SCRYIRVLG--DDVATRKYYASEADALNDAKRATTVGYLH 425
            .:|::.::...||....||      |.|...:.|  ..::....|.|.|............|::.
Mouse   902 TVVSLTQERKFESMYVEKLHGPYRNSVRKAHIYGITFSISQAFMYFSYAGCFRFGSYLIVNGHMR 966

  Fly   426 FAQ---NFSDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQVAY----FMQRKLRDKFS----- 478
            |..   .||..:|..:..| |:|..|.|:|:..:       ..||    |.::.|.|.:|     
Mouse   967 FKDVILVFSAIVLGAVALG-HASSFAPDYAKAKL-------SAAYLFSLFERQPLIDSYSGEGLW 1023

  Fly   479 --TFMRSVVKDCNVSTAIVDLPVQFQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISE 541
              .|..||    ..:..:.:.|.:...|:.....:|.::    |..:.:|.......:..|.:.|
Mouse  1024 PDKFEGSV----TFNEVVFNYPTRANVPVLQGLSLEVKK----GQTLALVGSSGCGKSTVVQLLE 1080

  Fly   542 RM-DGIWDRTLLAGVSATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLI 599
            |. |.:....||.|..|.::....|..||.|:   |.|.|::...:.:....||.:.::
Mouse  1081 RFYDPMAGSVLLDGQEAKKLNVQWLRAQLGIV---SQEPILFDCSIAENIAYGDNSRVV 1136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 67/261 (26%)
ABC2_membrane_3 322..702 CDD:463674 67/363 (18%)
YadH 513..710 CDD:440604 19/88 (22%)
Abcb4NP_032856.2 PTZ00265 30..1269 CDD:240339 155/774 (20%)
MdlB 39..632 CDD:440747 62/246 (25%)
Interaction with HAX1. /evidence=ECO:0000250 622..646 5/23 (22%)

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