DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and Abcb1b

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_035205.1 Gene:Abcb1b / 18669 MGIID:97568 Length:1276 Species:Mus musculus


Alignment Length:628 Identity:124/628 - (19%)
Similarity:241/628 - (38%) Gaps:156/628 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAVEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVV 65
            |..:|.:|.:..|.|:|..:| |..||:.|..|....|:|.|||||:|.:..:  ||..:..|.|
Mouse   388 MGNLEFKNVHFNYPSRSEVQI-LKGLNLKVKSGQTVALVGNSGCGKSTTVQLM--QRLYDPLEGV 449

  Fly    66 VLGAKPGEPGSGVPGSRVGFMPQEIALVEE------MTVKETIFYFGRIYGLTDERIREKFKLLK 124
            |     ...|..:....|.::.:.|.:|.:      .|:.|.|     .||..|..:.|..|.:|
Mouse   450 V-----SIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENI-----RYGREDVTMDEIEKAVK 504

  Fly   125 E------LLQLPPARQMI-----KQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIW 178
            |      :::||.....:     .|.||||::|::.|.|::.:|::|:|||.|..||.. .|.:.
Mouse   505 EANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTE-SEAVV 568

  Fly   179 DFLVETTRNSKLAVIITTHYIEEAKQANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAF-LILS 242
            ...::..|..:..::| .|.:...:.|:.|.....||::.:.....:|.:.|..     | |:::
Mouse   569 QAALDKAREGRTTIVI-AHRLSTVRNADVIAGFDGGVIVEQGNHDELMREKGIY-----FKLVMT 627

  Fly   243 QRQGNE--------------DELAQIMDHNKNQALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLN 293
            |.:|||              |......:.:|:..:..::..    ..|.....|:: :..:|.::
Mouse   628 QTRGNEIEPGNNAYGSQSDTDASELTSEESKSPLIRRSIYR----SVHRKQDQERR-LSMKEAVD 687

  Fly   294 ENRKKIFFTTKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGE 358
            |:...:.|   .|:..|....:..|.   .|::..::...|| ..|.:...:.     :||:|  
Mouse   688 EDVPLVSF---WRILNLNLSEWPYLL---VGVLCAVINGCIQ-PVFAIVFSRI-----VGVFS-- 738

  Fly   359 VENYGECFDENLVTVYKDSDNESCLFNKLSCR----YIRVLGDDVATRKYYASEADALNDAKRAT 419
                            :|.|:|:   .:.:|.    :..|:|                       
Mouse   739 ----------------RDDDHET---KRQNCNLFSLFFLVMG----------------------- 761

  Fly   420 TVGYL-HFAQNF----SDSILSVMEDGIHSSDGAVDHAELSIHIDMTDQQVAYFMQRK-----LR 474
            .:.:: :|.|.|    :..||:             ......:...|..|.:::|...|     |.
Mouse   762 LISFVTYFFQGFTFGKAGEILT-------------KRVRYMVFKSMLRQDISWFDDHKNSTGSLT 813

  Fly   475 DKFSTFMRSVVKDCNVSTAIVDLPVQFQEPIFGSTDIEFQQYCAPGVVMTMVF-FLATLMTAAVF 538
            .:.::...||........|:|...|               .....||::::|: :..||:...:.
Mouse   814 TRLASDASSVKGAMGARLAVVTQNV---------------ANLGTGVILSLVYGWQLTLLLVVII 863

  Fly   539 ISERMDGIWDRTLLAGVSATEMLWAHLLTQLIIMALQSFEVIM 581
            ....:.||.:..||:|.:..:.....:..::...|:::|..|:
Mouse   864 PLIVLGGIIEMKLLSGQALKDKKQLEISGKIATEAIENFRTIV 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 69/258 (27%)
ABC2_membrane_3 322..702 CDD:463674 41/275 (15%)
YadH 513..710 CDD:440604 13/70 (19%)
Abcb1bNP_035205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
PTZ00265 55..1270 CDD:240339 124/628 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 633..659 2/25 (8%)
Blue background indicates that the domain is not in the aligned region.

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