DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and pgp-11

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_001364583.1 Gene:pgp-11 / 183971 WormBaseID:WBGene00004005 Length:1241 Species:Caenorhabditis elegans


Alignment Length:234 Identity:45/234 - (19%)
Similarity:84/234 - (35%) Gaps:52/234 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SIYLCLFLLLSVSAVVTQRETSLRVIDALRDLHPAYK--QLRDVVVQA-VAGAKLNS--SEVIFK 61
            |:|:.:...||:.|......|.|...|.:..:.|.|:  .|...:::. :||..|.:  .:::.:
 Worm    88 SMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMME 152

  Fly    62 FNIDIASR------KESF----------MQTAIKTEA--NVLRQVNGQSINIDTS---CLGFLRQ 105
            .....|.|      ||.|          |:.|.|:.|  ......:||.|.|...   |...|.|
 Worm   153 RGYTSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQ 217

  Fly   106 SIDVNMNLAGV------SFTNCLNNVDASLASEI-----TRVYAEL------QVNETSFVNLSV- 152
            ...:.|..:|:      |...|.:::...|...|     |.::..:      ::|..:..|:.: 
 Worm   218 PSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIK 282

  Fly   153 --------YDVFRGQNVFVNPQTIVDRLVEKLSSLQQAP 183
                    |.|:.|.::..:..|.....:.|....:..|
 Worm   283 IVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 44/232 (19%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
pgp-11NP_001364583.1 PTZ00265 38..1235 CDD:240339 45/234 (19%)
MdlB 46..610 CDD:440747 45/234 (19%)
Blue background indicates that the domain is not in the aligned region.

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