DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and CCT3

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_650572.2 Gene:CCT3 / 42029 FlyBaseID:FBgn0015019 Length:544 Species:Drosophila melanogaster


Alignment Length:570 Identity:130/570 - (22%)
Similarity:224/570 - (39%) Gaps:121/570 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKL 97
            |.:|:...:|....:||.:...:||:....::....|...:|.||..:.:.|.:    |:..||.
  Fly    20 GRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QHPAAKS 80

  Fly    98 VQDVANNTNEEAGDGTTTATVLARAI--AKEGFEKISRGASPVEIRRGVMLAIETVKDNLR-RLS 159
            :.::|...:||.|||||:..|||..:  |.|.|  :.:...|..|.|....|:|.:..:|: :||
  Fly    81 MIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPF--LQQQIHPTVIIRAYREALEDIVGHLQSQLS 143

  Fly   160 RPVNTPEEICQVATISA-NGDKSVGNLISEAIKKVGRDGVITV---KDGKTLCD----------- 209
            ..::..::......:.| .|.|.:|.. |:...|:..|.|.||   ::|:...|           
  Fly   144 IQLDVKDKAKMADVVKACVGTKFIGKW-SDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIP 207

  Fly   210 -----ELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRK 269
                 |..|::|:..::....|......:..::     :||.|..:.|...|           :.
  Fly   208 GGAIEESCVLKGVMINKDVTHPKMRRLIENPRI-----VLLDCSLEYKKGES-----------QT 256

  Fly   270 PLVIIAE-------DLEAEALSTLVVNRLKVGLQVCAVK------APGFGDNRKENLMDMAVATG 321
            .:.||.|       .:|.|.:.       ::...:.|||      ..|..|..:..|:       
  Fly   257 NVEIIGEQDFTRMLQIEEEFVQ-------RICADIIAVKPDLVFTEKGVSDLAQHYLL------- 307

  Fly   322 GIVFGDEANMVRLEDIKMSDFGRV----GEVVVSKDDTMLLKGKGQKA---EVEKRVEGLREAIK 379
                  :|.:..:..::.:|..|:    |..:|::.:.:..|..|..|   ||:|        |.
  Fly   308 ------KAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKK--------IG 358

  Fly   380 ESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAV-EEGIVPGGGTA 443
            :...::..|..:.:...:     ||| |.|.|: ::|.:..:.|||:..|..| |..:|.|||..
  Fly   359 DEYFTFVTECKEPKACTI-----LLR-GASKDI-LNETERNLQDALHVARNLVLEPRLVAGGGAV 416

  Fly   444 LLRCIQKL--NDLKGANEDQNMGIEIIRRALRMPC-------LTI--AKNAGVDGAMVVAKVEIL 497
            .:...|.|  ..:||........:|||.|.|...|       ||.  ||:|...|..|.|     
  Fly   417 EMAASQLLTRKQVKGPYTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCA----- 476

  Fly   498 DGDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVT 547
               :|.|...||..:|..:.|.:|..|.......|...|.||...:.:|:
  Fly   477 ---WGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVS 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 130/570 (23%)
CCT3NP_650572.2 chap_CCT_gamma 7..528 CDD:274085 130/570 (23%)

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