DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and fab1

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster


Alignment Length:718 Identity:128/718 - (17%)
Similarity:217/718 - (30%) Gaps:280/718 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMRMFRYTNTLQRTAKISHVL--WARNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVI 63
            :.:|.|..|..|...|:..:|  .|.|:     |.||..:..|..:....:...|..|.:..:.|
  Fly   467 LAQMLRAHNLDQEWDKVLQMLCSTAANH-----FKPEHCSNDLMDIRNYVNFKKVPGGRRKDSKI 526

  Fly    64 IEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGF 128
            :.           ||..:|::|.||...::                                 .|
  Fly   527 VH-----------GVAFSKNVAHKDMATHV---------------------------------PF 547

  Fly   129 EKISRGASPVEIRR--GVMLAIETV----KDNLRRL-SRPVNTPEEICQVATISANGDKSVGNLI 186
            .:|.....|:...|  |..:.||||    |:.||.: :|.::....:..|       .|:|..:.
  Fly   548 PRILLLQCPIVYERIEGKFVTIETVLLQEKEYLRNVCARIMSFKPNVVLV-------HKNVAGIA 605

  Fly   187 SEAIKKVGRDGVITVK------DGKTL-CDELEVIE-GMKFDR-GYISPYFINTSKGAKVEFQDA 242
            .:.::......|:.||      ..:|| ||.:..|| .:...: ||.:.::|....|..:.|.:.
  Fly   606 QDLLRSYEVTLVLDVKLSVMERLSRTLQCDIVSSIESNITMPKLGYCNDFYIRNYNGKTLMFFEK 670

  Fly   243 L---------------------------LLFCE---------------KKIKSAPSIVPALELAN 265
            |                           |||..               :.:...|||..:.|.:.
  Fly   671 LTNPRGYTCLLRGGSNAELTRVKRVASALLFARYNWRLEMSFLLNEFAQPLSPKPSIFDSKETSP 735

  Fly   266 --------AQRKPLV-----------IIAEDL----------EAEALST----------LVV--- 288
                    ..::|::           |::|::          :||||||          |.|   
  Fly   736 KTETEAELRSKRPIILERKSEDKITTIVSENVSDFTDPLRASQAEALSTSPCAPPVVEALAVEPR 800

  Fly   289 --NRLKVGLQVCAVKAPGF----------GDNRKENLMDMAVATGGIVFGDEANMVRLE-DIKMS 340
              ||.:..|....:....|          ...||..|..:..|.  :.|..:.:...|| ...|.
  Fly   801 YDNRFRTALSSTLLSVSPFLTFPLPYLETEQGRKCKLRKLFPAE--LYFSKQWSRTGLERPDSMG 863

  Fly   341 DFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLRE---AIKESTSSYEKEKMQERLARLSSGVA 402
            |    ||.           ||.:....|.:::.|..   .:.:.|:......:|.:||...|...
  Fly   864 D----GEA-----------GKSEPGNKENQMQLLPAHDFVLMKITAPASSRDIQSKLAEFRSFGG 913

  Fly   403 LLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLND---LKGANEDQNMG 464
            .|..|.:..:...:|...||..             |          ||:::   .|.|.:.||  
  Fly   914 RLPKGKAPMLRPKKKNAEVIQR-------------P----------QKVSEEQLYKDALDPQN-- 953

  Fly   465 IEIIRRALRMPCLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIER------------- 516
                  ..|:|.|..:.:....|.....|:.:|.....|    |:|..|:|:             
  Fly   954 ------HQRLPVLFCSFHYNPKGVSSFCKLPMLLDMKFY----GQYDIMLEQFLQRYCCLFNSMC 1008

  Fly   517 ------------------GII-----------DPTKVVRTAISDAAGVASLLTTAEAVVTELPLE 552
                              |.:           |||::..|         |..:...|....:||.
  Fly  1009 PSCNLPMLGHVRRYVHSLGCVHVYLTEDLTRSDPTRIYFT---------SWCSICNATTPTIPLS 1064

  Fly   553 EAA 555
            :||
  Fly  1065 DAA 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 116/680 (17%)
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264
DEP 329..397 CDD:214489
Fab1_TCP 464..717 CDD:239450 55/305 (18%)
PIPKc_PIKfyve 1479..1796 CDD:340437
Blue background indicates that the domain is not in the aligned region.

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