DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60C and Cct4

DIOPT Version :10

Sequence 1:NP_608948.2 Gene:Hsp60C / 33796 FlyBaseID:FBgn0031728 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_033967.1 Gene:Cct4 / 12464 MGIID:104689 Length:539 Species:Mus musculus


Alignment Length:553 Identity:128/553 - (23%)
Similarity:235/553 - (42%) Gaps:86/553 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 EVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIALKDKFQNIGAKLVQ 99
            ::|...:.....:|||:..::||||.:.:|:...|...||.||.|:.|.:    :..:..|:::.
Mouse    32 QIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQM----QVLHPAARMLV 92

  Fly   100 DVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPV-- 162
            :::...:.|||||||:..::|.::.....:.:.:|..|..|......|:|...:.|..:||||  
Mouse    93 ELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQL 157

  Fly   163 NTPEEICQVATISANGD--KSVGNLIS----EAIKKV----------GRDGVITVKDGKTLCDEL 211
            :..|.:...||.|.|..  ....:|:|    .|:.||          .||..|..|.|.|: |:.
Mouse   158 SDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTI-DDC 221

  Fly   212 EVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSI-----VPALELANAQRKPL 271
            |::||:...:...:.......| ||:    .|:.||    .|||..     :...:.|...|   
Mouse   222 ELVEGLVLTQKVANSGITRVEK-AKI----GLIQFC----LSAPKTDMDNQIVVSDYAQMDR--- 274

  Fly   272 VIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLED 336
             ::.|  |...:..||....|.|..|..:        :|..|.| |::...:.|.::..::.::|
Mouse   275 -VLRE--ERAYILNLVKQIKKTGCNVLLI--------QKSILRD-ALSDLALHFLNKMKIMVVKD 327

  Fly   337 IKMSDFGRVGEVVVSK------DDTMLLKGKGQKAEVEKRVEGLREAIKESTSSYEKEKMQERLA 395
            ::..|...:.:.:.:|      ..|..:.|..:.|| |..:.|..:..|.:..:           
Mouse   328 VEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAE-EVSLNGSGKLFKITGCT----------- 380

  Fly   396 RLSSG-VALLRVGGSSDVEVSEKKDRVIDALNATRAAVEE-GIVPGGGT----ALLRCIQKLNDL 454
              |.| ...:.|.||:.:.:.|.:..:.|||...|..|:: .::.|||.    ..||..:....|
Mouse   381 --SPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTL 443

  Fly   455 KGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKV--EILDGD--YGYDALKGEYGNMIE 515
            .|.   ::..:.....|:.:...|:|:|||::....|.::  ....|:  .|.:..||...|::|
Mouse   444 SGM---ESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILE 505

  Fly   516 RGIIDPTKVVRTAISDAA-GVASLLTTAEAVVT 547
            ..::.|..|..:|::.|. .|.|:|...:.|.|
Mouse   506 EMVVQPLLVSVSALTLATETVRSILKIDDVVNT 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60CNP_608948.2 GroEL 28..548 CDD:239460 128/553 (23%)
Cct4NP_033967.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
TCP1_delta 25..538 CDD:239454 127/551 (23%)
Blue background indicates that the domain is not in the aligned region.

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