DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Lam and KRT31

Sequence 1:NP_001245892.1 Gene:Lam FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_002268.2 Gene:KRT31 HGNCID:6448 Length:416 Species:Homo sapiens

Alignment Length:451 Identity:119/452 (26%)
Similarity:196/452 (43%) Gaps:109/452 (24%)


  Fly    32 PPSTHSQTASSPLS-PTRHSRV----------AEKVELQNLNDRLATYIDRVRNLETENSRLTIE 85
            |||.||.|.....: |...|..          :||..:|.||||||:|:::||.||.:|:.    
Human    23 PPSCHSCTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLNDRLASYLEKVRQLERDNAE---- 83

  Fly    86 VQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDI-----KRLWEENEELKNKLDK 145
                                         |::..|:|::.:..:     :..::..|||:.|:  
Human    84 -----------------------------LENLIRERSQQQEPLLCPSYQSYFKTIEELQQKI-- 117

  Fly   146 KTKECTTAEGNVRMY------ESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRK 204
               .||.:| |.|:.      :..|::...||....:.|:.:..|:|              ..|:
Human   118 ---LCTKSE-NARLVVQIDNAKLAADDFRTKYQTELSLRQLVESDIN--------------GLRR 164

  Fly   205 NLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDA----KLK 265
            .|::.||.:.|||..::||:|||......|.||:|..|       .::..||:.|.||    .|.
Human   165 ILDELTLCKSDLEAQVESLKEELLCLKSNHEQEVNTLR-------CQLGDRLNVEVDAAPTVDLN 222

  Fly   266 QSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANIN 330
            :.|.|.|:|||..::.||.|::..:..:.:.|.:....:|       |:|:|.:..|..|...:|
Human   223 RVLNETRSQYEALVETNRREVEQWFTTQTEELNKQVVSSS-------EQLQSYQAEIIELRRTVN 280

  Fly   331 ELEQANADLNAR--IRD-LERQLDNDRERHGQE-------IDLLEKELIRLREEMTQQLKEYQDL 385
            .||   .:|.|:  :|| ||..|.....|:..:       |..:|.:|..:|.::.:|.:|||.|
Human   281 ALE---IELQAQHNLRDSLENTLTESEARYSSQLSQVQSLITNVESQLAEIRSDLERQNQEYQVL 342

  Fly   386 MDIKVSLDLEIAAYDKLLVGEEARLNITP-ATNTATVQSFSQSLRN--STRATPSRRTPSA 443
            :|::..|:.||..|..||..|:..|...| ||..|..:.....|.|  ::...|:..||.|
Human   343 LDVRARLECEINTYRSLLESEDCNLPSNPCATTNACSKPIGPCLSNPCTSCVPPAPCTPCA 403

Known Domains:


GeneSequenceDomainRegion External IDIdentity
LamNP_001245892.1 Filament 54..409 CDD:278467 100/380 (26%)
Ax_dynein_light <283..377 CDD:287215 24/104 (23%)
LTD 466..572 CDD:279300
KRT31NP_002268.2 Head 1..56 8/33 (24%)
Filament 55..366 CDD:306535 100/381 (26%)
Coil 1A 57..91 16/67 (24%)
Linker 1 92..102 0/10 (0%)
Coil 1B 103..203 32/127 (25%)
Linker 12 204..219 5/15 (33%)
Coil 2 220..363 44/153 (29%)
Tail 364..416 11/41 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.667 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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