DRSC/TRiP Functional Genomics Resources

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Protein Alignment nompC and trpc3

DIOPT Version :9

Sequence 1:NP_523483.2 Gene:nompC / 33768 FlyBaseID:FBgn0016920 Length:1761 Species:Drosophila melanogaster
Sequence 2:NP_001276813.2 Gene:trpc3 / 101887082 ZFINID:ZDB-GENE-140129-1 Length:902 Species:Danio rerio


Alignment Length:984 Identity:218/984 - (22%)
Similarity:376/984 - (38%) Gaps:281/984 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   889 CTEENKAGFTAVHLAAQNGHGQVLDVLKSTNSLRINSKKLGLTP---LHVAAYYGQADTVRELLT 950
            |.:|...|..|.||.:      |..|.:|:...|.|.|.....|   :.:....|:...:|.   
Zfish    24 CWKEENGGVDAHHLKS------VKTVRESSGYYRYNMKSSESFPHRRMTLPREKGRRQAIRG--- 79

  Fly   951 SVPATVKSETPTGQSLFGDLGTESGMTP-----LHLAAFSGNENVVRLLLNSAGVQVDAATIE-- 1008
              ||          .:|...||  .:||     |..|.: ||..|||.:|.      ::.|:.  
Zfish    80 --PA----------FMFNARGT--SLTPEEERFLDAAEY-GNIPVVRKMLE------ESLTLNVN 123

  Fly  1009 ----NGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTG--LHIAAMHGHIQMVEILLG-- 1065
                .|.|.|.||....|:.|..|||.|        |...|.|  |.:|...|::::||.|||  
Zfish   124 CMDYMGQNGLQLAVGNEHLEVTELLLRR--------DNLARVGDALLLAISKGYVRIVEALLGHP 180

  Fly  1066 ---------------QGAEINATDRNGW------TPLHCAAKAGHLEVVKLLCEAGASPKSETNY 1109
                           |..:..:.|.:|.      ||:..||.....|||.:|...||..:...:|
Zfish   181 SFGNGERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLLKGARIERPHDY 245

  Fly  1110 GCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMVVSKNHNNKPIQEF-VLVSPA--- 1170
            .|...  ..:|          .:..|::                 :|:...|..: .|.|||   
Zfish   246 FCKCA--DCTE----------KQRKDSF-----------------SHSRSRINAYRGLASPAYLS 281

  Fly  1171 -----PVDTAAKLSNIYIVLSTKEKERAKDLVAAGKQCEAMATELLALAAGSDSAGKILQATDKR 1230
                 ||.||.:|||....|:..|||...|......||:.....:|.|...::....||......
Zfish   282 LSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVSA 346

  Fly  1231 NVE----------FLDVLIENEQKEVIAHTVVQRYLQELWHGSLT-----WASWKILLLLVAFIV 1280
            .:|          .:.:.|:.|.|:.:||...|:.|..:|:.:|:     ..:.|.|::||..:.
Zfish   347 ELEEGQHHRSLLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTTAVKCLVVLVVALG 411

  Fly  1281 CPPVWIGFTFPMGHKFNKV---PIIKFMSYLTSHIYLMIHL------SIVGITPI-------YP- 1328
            .|.:.:|:.|....|..|:   |.:||:::..|.|..:..|      ...|||.:       :| 
Zfish   412 LPLLAVGYWFAPCSKLGKILRSPFMKFVAHAASFIIFLCLLVFNASDRFEGITTLPNVTVTDHPL 476

  Fly  1329 -VLRLSLVPY-WYEVGLLIWLSGLL---------------LFELTNPSDKSGLGSIKVLVLL--- 1373
             :.|:....: |.|:.:::|::|::               :.:|.|..|   .|.:.:.:..   
Zfish   477 QIFRVKTTQFSWTEILIMVWVAGMMWSECKELWTEGPREYIMQLWNVLD---FGMLSIFIAAFTA 538

  Fly  1374 -----------------------LGMAGVGVHVSAFLFVSKEYW----PTLVYCRNQCFALAFLL 1411
                                   |.|..:...|..|.: :::.|    |.|:  ....:|:|.:|
Zfish   539 RFFAFMQAMKAQKYVDEKIHAPDLSMVTLPPDVRYFTY-ARDKWLPSDPQLI--SEGLYAIAVVL 600

  Fly  1412 ACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLAVLAIFVF-GFSMHIVALNQSFANFSPEDLRS 1475
            :..:|...|..:..|||..|.:|..:||:.:|: ||.|.|| .|.:.:..|...:..        
Zfish   601 SFSRIAYILPANESFGPLQISLGRTVKDIFKFM-VLFIMVFLAFMIGMFILYSYYLG-------- 656

  Fly  1476 FEKKNRNRGYFSDDDMPTPRPPPVENYVDSRFSEFRRKHKDDLRMHPINSFELLFFAVFGQTTTE 1540
             .|.|             |....||                       .||:.||:::||     
Zfish   657 -AKVN-------------PAFTTVE-----------------------ESFKTLFWSIFG----- 679

  Fly  1541 QTQVDKIKNVATPTQPYWVEYLFKIVFGIYMLVSVVVLINLLIAMMSDTYQRIQAQSDIEWKFGL 1605
               :.::.:|.......::|.:..:::|||.:..||||:|:||||::.:||.|:..:|:||||..
Zfish   680 ---LSEVSSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFAR 741

  Fly  1606 SKL-IRNMHRTTTAPSPLNLV---TTWFMWIVEKVKARMKKKKRPSLVQMMGIRQASPRTKAGAK 1666
            ||| :.......|.|.|.::|   .::::.:...|.....:::|......:|:..:..:      
Zfish   742 SKLWLSYFDNGKTLPPPFSIVPSPKSFYLCVKRLVNLLRCRRRRLKKDVELGMDNSKSK------ 800

  Fly  1667 WLSKIKKDSVALSQVHLSPLGSQASF-SQANQ-NRIENVADWEAIAKKY--RALVGDEEGGSLKD 1727
             |:...:.|:.::..|        || |..|| .|.:.:  .:.:.|:|  :|.| |:|...:.:
Zfish   801 -LNLFTQSSMRMTDSH--------SFNSILNQPTRYQQI--MKRLIKRYVLKAQV-DKENDEVNE 853

  Fly  1728 SDAESGSQE 1736
            .:.:...|:
Zfish   854 GELKEIKQD 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nompCNP_523483.2 ANK repeat 129..157 CDD:293786
Ank_2 131..228 CDD:289560
ANK 155..319 CDD:238125
ANK repeat 159..186 CDD:293786
ANK repeat 232..265 CDD:293786
Ank_2 237..331 CDD:289560
ANK 263..387 CDD:238125
ANK repeat 267..298 CDD:293786
ANK repeat 300..331 CDD:293786
Ank_2 305..398 CDD:289560
ANK 329..454 CDD:238125
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
Ank_2 405..498 CDD:289560
ANK 428..555 CDD:238125
ANK repeat 433..463 CDD:293786
ANK repeat 469..499 CDD:293786
ANK 496..641 CDD:238125
ANK repeat 501..532 CDD:293786
Ank_2 507..616 CDD:289560
ANK repeat 534..575 CDD:293786
ANK repeat 577..616 CDD:293786
Ank_2 625..722 CDD:289560
ANK 654..780 CDD:238125
ANK repeat 660..690 CDD:293786
ANK repeat 692..723 CDD:293786
Ank_2 697..790 CDD:289560
ANK 720..847 CDD:238125
ANK repeat 725..757 CDD:293786
ANK repeat 759..790 CDD:293786
Ank_5 779..834 CDD:290568
ANK 787..915 CDD:238125 7/25 (28%)
ANK repeat 792..824 CDD:293786
ANK repeat 861..893 CDD:293786 1/3 (33%)
Ank_4 865..915 CDD:290365 7/25 (28%)
Ank_4 929..995 CDD:290365 17/73 (23%)
ANK repeat 932..972 CDD:293786 6/42 (14%)
ANK 969..1096 CDD:238125 45/162 (28%)
ANK repeat 974..1007 CDD:293786 10/37 (27%)
Ank_2 979..1074 CDD:289560 32/119 (27%)
ANK repeat 1009..1041 CDD:293786 11/31 (35%)
ANK 1039..1159 CDD:238125 29/144 (20%)
ANK repeat 1043..1074 CDD:293786 11/49 (22%)
Ank_2 1048..1135 CDD:289560 24/109 (22%)
ANK repeat 1076..1101 CDD:293786 9/30 (30%)
ANK repeat 1109..1134 CDD:293786 3/24 (13%)
Ion_trans <1393..1598 CDD:278921 51/209 (24%)
trpc3NP_001276813.2 trp 78..869 CDD:273311 204/924 (22%)
ANK 101..233 CDD:238125 40/146 (27%)
ANK repeat 128..159 CDD:293786 13/38 (34%)
ANK repeat 206..241 CDD:293786 11/34 (32%)
TRP_2 247..306 CDD:285535 17/87 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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