| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001364618.1 | Gene: | col-78 / 189274 | WormBaseID: | WBGene00000654 | Length: | 328 | Species: | Caenorhabditis elegans |
| Alignment Length: | 249 | Identity: | 95/249 - (38%) |
|---|---|---|---|
| Similarity: | 112/249 - (44%) | Gaps: | 78/249 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 986 GVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGNQGFPGL 1050
Fly 1051 D-------GPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAGPPGEKG 1108
Fly 1109 DQGRSGIDGRDGINGE----KGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAVGY 1169
Fly 1170 PGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERG-------IRGQPG 1216 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | |
| gly_rich_SclB | <355..>642 | CDD:468478 | |||
| gly_rich_SclB | <543..820 | CDD:468478 | |||
| gly_rich_SclB | <727..>968 | CDD:468478 | |||
| gly_rich_SclB | <969..>1218 | CDD:468478 | 95/249 (38%) | ||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | 13/38 (34%) | ||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-78 | NP_001364618.1 | gly_rich_SclB | <138..>314 | CDD:468478 | 91/234 (39%) |
| Blue background indicates that the domain is not in the aligned region. | |||||