| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_492936.1 | Gene: | col-65 / 187138 | WormBaseID: | WBGene00000641 | Length: | 301 | Species: | Caenorhabditis elegans |
| Alignment Length: | 260 | Identity: | 94/260 - (36%) |
|---|---|---|---|
| Similarity: | 111/260 - (42%) | Gaps: | 64/260 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 256 KGEKGASC-YGPMKPGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQKGEPGLVGRKGEPGPEG 319
Fly 320 DTGLDGQKGEKGLP----------------GGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGLPGN 368
Fly 369 PGQKGEPGRAGATGKPGLLGPPGPPG-GGRGTPGPPGPKGPRGYVGAPGPQGLNGVDGLPGPQGY 432
Fly 433 NGQKGGAGLPGRPGNEGPPGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLP-----GY 492
Fly 493 492 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | 36/121 (30%) |
| gly_rich_SclB | <355..>642 | CDD:468478 | 60/144 (42%) | ||
| gly_rich_SclB | <543..820 | CDD:468478 | |||
| gly_rich_SclB | <727..>968 | CDD:468478 | |||
| gly_rich_SclB | <969..>1218 | CDD:468478 | |||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-65 | NP_492936.1 | Col_cuticle_N | 4..56 | CDD:198156 | |
| gly_rich_SclB | <109..>248 | CDD:468478 | 61/150 (41%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||