Protein Alignment Col4a1 and col-181

DIOPT Version :10

• Sequence 1: NP_723044.1
• Gene: Col4a1 / 33727
• FlyBaseID: FBgn0000299
• Length: 1779
• Species: Drosophila melanogaster
• Sequence 2: NP_001041295.1
• Gene: col-181 / 181378
• WormBaseID: WBGene00000754
• Length: 332
• Species: Caenorhabditis elegans
• Alignment Length: 268
• Identity: 99/268 - (36%)
• Similarity: 111/268 - (41%)
• Gaps: 77/268 - (28%)

  Fly   735 DKGSFGRSGEKGEPGSCA-LDEIKMPAKGNKGE-------PGQTGMPGPPGEDGSPGERGYTGLK 791
            |:.:|.|.......|..| |:.::.|.|....|       .|..|.|||||.|||.|:.|..|..
 Worm   101 DEVNFCRVRATSLEGELAKLNVVRAPRKARAAEGTCCSCGVGSAGPPGPPGFDGSAGKDGSNGRP 165

  Fly   792 GNTG----------------------PQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRG 834
            ||.|                      |.||||..||.|.||..||            ||:|||.|
 Worm   166 GNPGEDADGDDYKPDASQFCFDCPEAPAGPPGRPGPDGENGGAGE------------PGRDGLAG 218

  Fly   835 IPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPG 899
            .||..|.|||||..|  .||..||.|..|.||  |......|.|.|||      ||.:|..|.||
 Worm   219 RPGARGSPGPRGPSG--NPGADGPAGQLGPQG--GSNVAPSPAGEPGA------PGAQGPKGPPG 273

  Fly   900 VSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRG----- 959
            .:||||..|:               ||.||..|..|.|||.|:.||.|..|.||.:|.||
 Worm   274 AAGRPGRDGQ---------------PGAPGDQGENGPDGAPGKSGSDGQPGAPGKEGSRGGCDHC 323

  Fly   960 -----APG 962
                 |||
 Worm   324 PPPRTAPG 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Col4a1	NP_723044.1	gly_rich_SclB	<107..>361	CDD:468478
		gly_rich_SclB	<355..>642	CDD:468478
		gly_rich_SclB	<543..820	CDD:468478	37/114 (32%)
		gly_rich_SclB	<727..>968	CDD:468478	99/268 (37%)
		gly_rich_SclB	<969..>1218	CDD:468478
		gly_rich_SclB	<1186..>1420	CDD:468478
		gly_rich_SclB	<1321..>1547	CDD:468478
		C4	1555..1662	CDD:128421
		C4	1663..1777	CDD:128421
col-181	NP_001041295.1	Col_cuticle_N	65..117	CDD:198156	4/15 (27%)
		gly_rich_SclB	<156..>318	CDD:468478	75/198 (38%)