| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_506300.1 | Gene: | col-161 / 179812 | WormBaseID: | WBGene00000734 | Length: | 291 | Species: | Caenorhabditis elegans |
| Alignment Length: | 220 | Identity: | 91/220 - (41%) |
|---|---|---|---|
| Similarity: | 103/220 - (46%) | Gaps: | 39/220 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 521 NAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKG-DMGIKGDVGGKCSSCRAGPKGDKGTS 584
Fly 585 GLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLI 649
Fly 650 EPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPG 714
Fly 715 IPGQSIKGEPGFHGRDGAKGDKGSF 739 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | |
| gly_rich_SclB | <355..>642 | CDD:468478 | 53/121 (44%) | ||
| gly_rich_SclB | <543..820 | CDD:468478 | 80/198 (40%) | ||
| gly_rich_SclB | <727..>968 | CDD:468478 | 4/13 (31%) | ||
| gly_rich_SclB | <969..>1218 | CDD:468478 | |||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-161 | NP_506300.1 | Col_cuticle_N | 5..57 | CDD:198156 | |
| gly_rich_SclB | <108..>261 | CDD:468478 | 77/186 (41%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||