| Sequence 1: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001379164.1 | Gene: | col-160 / 179804 | WormBaseID: | WBGene00000733 | Length: | 317 | Species: | Caenorhabditis elegans |
| Alignment Length: | 304 | Identity: | 105/304 - (34%) |
|---|---|---|---|
| Similarity: | 123/304 - (40%) | Gaps: | 80/304 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 699 GNDGTPGRAGRDGY---PGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPA 760
Fly 761 KGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPG 825
Fly 826 NPGKDGLRGIPGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPG 890
Fly 891 DRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPG-IDGVRGRDGAKGEPGSPGLVGMPGN 954
Fly 955 KGDRGA--PGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGA 996 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Col4a1 | NP_723044.1 | gly_rich_SclB | <107..>361 | CDD:468478 | |
| gly_rich_SclB | <355..>642 | CDD:468478 | |||
| gly_rich_SclB | <543..820 | CDD:468478 | 29/123 (24%) | ||
| gly_rich_SclB | <727..>968 | CDD:468478 | 81/243 (33%) | ||
| gly_rich_SclB | <969..>1218 | CDD:468478 | 15/28 (54%) | ||
| gly_rich_SclB | <1186..>1420 | CDD:468478 | |||
| gly_rich_SclB | <1321..>1547 | CDD:468478 | |||
| C4 | 1555..1662 | CDD:128421 | |||
| C4 | 1663..1777 | CDD:128421 | |||
| col-160 | NP_001379164.1 | Col_cuticle_N | 18..70 | CDD:198156 | |
| gly_rich_SclB | <129..>303 | CDD:468478 | 84/229 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||