Protein Alignment Col4a1 and col-125

DIOPT Version :10

• Sequence 1: NP_723044.1
• Gene: Col4a1 / 33727
• FlyBaseID: FBgn0000299
• Length: 1779
• Species: Drosophila melanogaster
• Sequence 2: NP_502107.1
• Gene: col-125 / 178029
• WormBaseID: WBGene00000699
• Length: 299
• Species: Caenorhabditis elegans
• Alignment Length: 262
• Identity: 98/262 - (37%)
• Similarity: 117/262 - (44%)
• Gaps: 67/262 - (25%)

  Fly  1251 PAGVAGAKG---DRGLQGPPGASGLNG-----IPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGR 1307
            |:|...|:.   |.|:.|  ||:...|     :|||.|..|..|:              |||||:
 Worm    71 PSGNRTARQAGYDAGVTG--GAASAGGCDACCLPGAAGPAGTPGK--------------PGRPGK 119

  Fly  1308 NGRQGLIGAPGLIGERGLPGLAGEP------GLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPG 1366
            .|..||.|.||...::....:...|      |..|.|||.|||   |:.|..|:||.|||||.||
 Worm   120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPA---GDAGANGNPGAPGQDGQPG 181

  Fly  1367 APGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAP 1431
            |||.||.:||.|                       .| |.||..||      ||.:....|: .|
 Worm   182 APGNKGPSGPNG-----------------------NP-GAPGAPGQ------PGQDAPSEPI-TP 215

  Fly  1432 GERGFTGPKGRDGRDGTPGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGE 1496
            |..|..||.|..|:.|.||.||..|:||   .|||||..|.||..|..|.||.||:.|..|..||
 Worm   216 GAPGPAGPAGPQGQPGAPGQPGHDGQPG---APGPKGPNGNPGAPGADGNPGAPGQAGTAGGAGE 277

  Fly  1497 RG 1498
            :|
 Worm   278 KG 279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Col4a1	NP_723044.1	gly_rich_SclB	<107..>361	CDD:468478
		gly_rich_SclB	<355..>642	CDD:468478
		gly_rich_SclB	<543..820	CDD:468478
		gly_rich_SclB	<727..>968	CDD:468478
		gly_rich_SclB	<969..>1218	CDD:468478
		gly_rich_SclB	<1186..>1420	CDD:468478	61/182 (34%)
		gly_rich_SclB	<1321..>1547	CDD:468478	72/184 (39%)
		C4	1555..1662	CDD:128421
		C4	1663..1777	CDD:128421
col-125	NP_502107.1	Col_cuticle_N	12..64	CDD:198156
		gly_rich_SclB	<102..>261	CDD:468478	79/209 (38%)