Protein Alignment Col4a1 and col-121

DIOPT Version :10

• Sequence 1: NP_723044.1
• Gene: Col4a1 / 33727
• FlyBaseID: FBgn0000299
• Length: 1779
• Species: Drosophila melanogaster
• Sequence 2: NP_501655.1
• Gene: col-121 / 177771
• WormBaseID: WBGene00000695
• Length: 359
• Species: Caenorhabditis elegans
• Alignment Length: 265
• Identity: 97/265 - (36%)
• Similarity: 121/265 - (45%)
• Gaps: 51/265 - (19%)

  Fly  1343 PAGSKGERGLAGSPGQPGQDGFPGAPGLKG---DTGPQGFKGERGLNGFEGQKGDKGDRGLQGPS 1404
            |.|..||.|..|:.||||..|.||:|||:|   |..||     ..|.......|.:|.||.||..
 Worm    95 PQGPIGEEGSPGNDGQPGTPGKPGSPGLEGVDVDLEPQ-----EELPCSICPAGPQGPRGAQGER 154

  Fly  1405 GLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPG--MLPPPGPK 1467
            ||||..|:||.:|..|..|..|.:||.|.:|.|         ||.|.||.||.||  ::...|.|
 Worm   155 GLPGNAGRKGKSGKSGHPGQPGGIGASGAKGPT---------GTRGTPGMKGPPGDTIIAGEGIK 210

  Fly  1468 GEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPKGDRGEPGERGYE-- 1530
            |.||..|..||||.||..|...  .|:|..|:.|::|.||.||..|:.|.:|..|.|||.|..
 Worm   211 GPPGLQGSQGPKGPPGNSGRSS--NIRGPSGKPGQQGGIGGTGKFGKYGEQGGIGAPGEPGLPAT 273

  Fly  1531 ------GAIGLIGQKG------------EPGAPAPAALDYLTGILI----------TRHSQSETV 1567
                  |...::.|.|            :.||||....:|.:...|          |.:.|.|||
 Worm   274 YCPSDCGVNTILSQFGSRAQHPESINGEDNGAPAANTEEYNSEERIESPAPPAPQPTTNQQQETV 338

  Fly  1568 PACSA 1572
            .|.::
 Worm   339 AAAAS 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Col4a1	NP_723044.1	gly_rich_SclB	<107..>361	CDD:468478
		gly_rich_SclB	<355..>642	CDD:468478
		gly_rich_SclB	<543..820	CDD:468478
		gly_rich_SclB	<727..>968	CDD:468478
		gly_rich_SclB	<969..>1218	CDD:468478
		gly_rich_SclB	<1186..>1420	CDD:468478	35/79 (44%)
		gly_rich_SclB	<1321..>1547	CDD:468478	88/228 (39%)
		C4	1555..1662	CDD:128421	7/28 (25%)
		C4	1663..1777	CDD:128421
col-121	NP_501655.1	Col_cuticle_N	14..60	CDD:460226
		gly_rich_SclB	<95..>271	CDD:468478	82/191 (43%)