Protein Alignment Col4a1 and col-7

DIOPT Version :10

• Sequence 1: NP_723044.1
• Gene: Col4a1 / 33727
• FlyBaseID: FBgn0000299
• Length: 1779
• Species: Drosophila melanogaster
• Sequence 2: NP_492090.1
• Gene: col-7 / 172494
• WormBaseID: WBGene00000596
• Length: 316
• Species: Caenorhabditis elegans
• Alignment Length: 288
• Identity: 96/288 - (33%)
• Similarity: 116/288 - (40%)
• Gaps: 114/288 - (39%)

  Fly   569 KCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRT---- 629
            |.|.|..|.:    .|..|.        ||||..|..|::||||..||.|.||:.|..|.:
 Worm    78 KQSQCNCGQQ----ASNCPA--------GPPGPPGASGDKGHDGQPGQAGKPGQPGVAGPSHHQK 130

  Fly   630 --------GLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEF 686
                    ||||..|.||:|.        | ||..|.||||    .||  |.:|.||.|||.|..
 Worm   131 QECIKCPQGLPGPAGVPGQPG--------P-KGPNGNPGAP----AQG--GGQGPPGPPGPAGSA 180

  Fly   687 GFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSC 751
            |..|:   :|||||.|:||::|:.|
 Worm   181 GSPGQ---AGAPGNPGSPGKSGQRG---------------------------------------- 202

  Fly   752 ALDEIKMPAKGNKGEPGQTGMPGPPGEDGSPGERGYTGLKGNT-GPQGPPGVEGPRGLNGPRGEK 815
                        :|.||.:|.|||.|..|:||:.|    .||. ||.||||..||.
 Worm   203 ------------RGLPGPSGAPGPQGPPGAPGQPG----SGNAPGPAGPPGPAGPN--------- 242

  Fly   816 GNQGAVGVPGNPGKDGLRGIPGRNGQPG 843
                  |.||:||:||..|.||.:|.||
 Worm   243 ------GQPGHPGQDGQPGAPGNDGTPG 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Col4a1	NP_723044.1	gly_rich_SclB	<107..>361	CDD:468478
		gly_rich_SclB	<355..>642	CDD:468478	30/84 (36%)
		gly_rich_SclB	<543..820	CDD:468478	83/263 (32%)
		gly_rich_SclB	<727..>968	CDD:468478	35/118 (30%)
		gly_rich_SclB	<969..>1218	CDD:468478
		gly_rich_SclB	<1186..>1420	CDD:468478
		gly_rich_SclB	<1321..>1547	CDD:468478
		C4	1555..1662	CDD:128421
		C4	1663..1777	CDD:128421
col-7	NP_492090.1	Col_cuticle_N	5..57	CDD:198156
		gly_rich_SclB	<103..>266	CDD:468478	85/251 (34%)