DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon25Biii and CG30088

DIOPT Version :10

Sequence 1:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:304 Identity:75/304 - (24%)
Similarity:113/304 - (37%) Gaps:91/304 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LALAVASASAF---------DEKVFVKDL-PKA-----TKIEGRITNGYAAPEGKAPYTVGLGFS 57
            :::::||.|.:         .|:|....| |..     :.:..||..|..|....||:...|.:|
  Fly     1 MSISLASTSIYICMCVCLVLQEQVAANFLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYS 65

  Fly    58 GGWWCGGSIIAHDWVLTAEHCI---------------------GDAASVIVYFGATWRTN-AQFT 100
            ....|||:||:..::|||.||:                     |..:.....|.....|. .:|.
  Fly    66 SEIHCGGTIISSRYILTAAHCMRPYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFD 130

  Fly   101 HTVGNGNFIKHSNADIALIRIPHVDFWHMVNKVELPSYNDRYN----------------NYNEWW 149
            ..:.|         ||||:::               |.|.|:|                |.:|:.
  Fly   131 RFLAN---------DIALLKL---------------SRNIRFNVHIQPICLILNPAAAPNVHEFQ 171

  Fly   150 AVACGWGGTYDGSPLPDWLQCVDLQIVHNEECGWTYG-SVGDNVICTRTVDGKSICGGDSGGPLV 213
            |.  |||.| :.:...:.||...|....|..|..... .:..|.:|. ...|...|.||||||||
  Fly   172 AF--GWGQT-ETNHSANVLQTTVLTRYDNRHCRSVLSMPITINQLCV-GFQGSDTCSGDSGGPLV 232

  Fly   214 T---HDG---SKLVGVSNFVSSNGCQSGAPAGFQRVTYHLDWIR 251
            |   :||   ...:|:.:| ..:.|||  |..:..|..::.|||
  Fly   233 TKVNYDGVWRYLQLGIVSF-GDDKCQS--PGVYTYVPNYIRWIR 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiiNP_608881.1 Tryp_SPc 37..253 CDD:238113 67/260 (26%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 65/258 (25%)

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