DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon25Biii and LOC101732176

DIOPT Version :9

Sequence 1:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_031752403.1 Gene:LOC101732176 / 101732176 -ID:- Length:516 Species:Xenopus tropicalis


Alignment Length:245 Identity:71/245 - (28%)
Similarity:110/245 - (44%) Gaps:31/245 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ATKIEGRITNGYAAPEGKAPYTVGLGFSGG---WWCGGSIIAHDWVLTAEHCI-GDAASVIV--- 87
            :||::.||..|..|..|..|:.:.|....|   :.||||||...|::||.||: |..:|..:   
 Frog   270 STKVDNRIVGGTFALAGDWPWQISLMKLVGTSLYLCGGSIITPYWIVTAAHCVYGYTSSPSIFKV 334

  Fly    88 ---------YFGATWRTNAQFTHTVGNGNFIKHSNADIALIRI-PHVDFWHMVNKVELPSYNDRY 142
                     |:.|.:..:....|...:.|   ..|.||||::: ..:.|...:..|.||:....:
 Frog   335 FAGSLTLSNYYSAGYLVDRVLIHPSYSPN---TQNYDIALLKLKTALVFSTNLRPVCLPNVGMPW 396

  Fly   143 NNYNEWWAVACGWGGTYDGSPLPDWLQCVDLQIVHNEECGW--TYGSV-GDNVICTRTV-DGKSI 203
            .:....|  ..|||.|.:...:...|:...:.|:.:..|..  .||.| ...:||...: .|...
 Frog   397 ADGQPCW--ISGWGTTSEAGSISTSLKAASVPIISSATCNLAPVYGGVISPTMICAGYLGGGTDT 459

  Fly   204 CGGDSGGPLVTHDGSK--LVGVSNFVSSNGC-QSGAPAGFQRVTYHLDWI 250
            |.|||||||||...|.  |||.:::  ..|| ::..|..:..:|..|:||
 Frog   460 CQGDSGGPLVTKTNSLWWLVGDTSW--GYGCARAYKPGVYGNITVFLEWI 507

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiiNP_608881.1 Tryp_SPc 36..250 CDD:214473 67/237 (28%)
Tryp_SPc 37..253 CDD:238113 68/238 (29%)
LOC101732176XP_031752403.1 LDLa <115..133 CDD:238060
LDLa 140..171 CDD:238060