DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3355 and Ovch2

DIOPT Version :10

Sequence 1:NP_608848.1 Gene:CG3355 / 33667 FlyBaseID:FBgn0031619 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:305 Identity:99/305 - (32%)
Similarity:148/305 - (48%) Gaps:58/305 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SIKAVRPPKSRNQCTAKQNCFCGTPNV-----------NRIVGGQQVRSNKYPWTAQL-VKGRHY 99
            ::.::|.|.            ||...|           :|||||.||....|||...| .|.:| 
  Rat    24 TLSSIRAPD------------CGKSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLKQKQKH- 75

  Fly   100 PRLFCGGSLINDRYVLTAAHCVHGNRDQITIRLL--QIDRSSRDPGIVRKVVQT-TVHPNYDPNR 161
               .|||::|:.::|:|||||:......:|:.:.  :.|.|..:||.....::| .:||.:...:
  Rat    76 ---ICGGTIISSQWVITAAHCMANRNIALTLNVTAGEHDLSQAEPGEQTLAIETIIIHPQFSTKK 137

  Fly   162 IVN-DVALLKLESPVPLTGNMRPVCLPEANHNFD-GKTAVVAGWGLIKEGGVTSNYLQEVNVPVI 224
            .:| |:||||:.........:|||||||....|: |.....||||.:.|||.....||:||:|::
  Rat   138 PMNYDIALLKMVGTFQFGQFVRPVCLPEPGEQFNAGYICTTAGWGRLSEGGSLPQVLQQVNLPIL 202

  Fly   225 TNAQCRQ---TRYKDKIAEVMLCAGLVQQGGKDACQGDSGGPLIV--NEGRYKLAGVVSFGYGCA 284
            |:.:|..   |.......:..||.| ...||:|||||||||.|:.  .:|.:.||||.|:|.||.
  Rat   203 THEECEAVMLTLRNPITGKTFLCTG-SPDGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWGLGCG 266

  Fly   285 ----------QKNAPGVYARVSKFLDWI---------RKNTADGC 310
                      ::.:||::..:.:.|.||         ||:|...|
  Rat   267 RSWRNNARKKEQGSPGIFTDLRRVLPWIHEHVQTGHRRKSTKASC 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3355NP_608848.1 Tryp_SPc 76..305 CDD:238113 90/258 (35%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 89/249 (36%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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