DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3355 and F7

DIOPT Version :10

Sequence 1:NP_608848.1 Gene:CG3355 / 33667 FlyBaseID:FBgn0031619 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_690059.1 Gene:F7 / 260320 RGDID:628678 Length:446 Species:Rattus norvegicus


Alignment Length:278 Identity:99/278 - (35%)
Similarity:144/278 - (51%) Gaps:20/278 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VVDPAEQSIK-AVRPPKSRNQCTAKQNCFCGTPNVNRIVGGQQVRSNKYPWTAQLVKGRHYPRLF 103
            |:.|.|.|.| .|..|..|.....|:|  ...|. .|||||......:.||.|.|   :....|.
  Rat   160 VLQPDEVSCKPKVEYPCGRIPVVEKRN--FSRPQ-GRIVGGYVCPKGECPWQAVL---KFNEALL 218

  Fly   104 CGGSLINDRYVLTAAHCV--HGNRDQITIRLLQIDRSSRDPGIVRKVVQTTVHPN-YDPNRIVND 165
            ||..|::.|:::|||||.  .|....||:.|.:.|.|.::.....::|:..:.|| |...|..:|
  Rat   219 CGAVLLDTRWIVTAAHCFDKFGKLVNITVVLGEHDFSEKEGTEQVRLVEQVIMPNKYTRGRTDHD 283

  Fly   166 VALLKLESPVPLTGNMRPVCLPEANHNFDGKTAV----VAGWGLIKEGGVTSNYLQEVNVPVITN 226
            :||::|..||..|..:.|:||||...:.:...::    |:|||.:.:.|.|:..|..:.||.:..
  Rat   284 IALVRLHRPVTFTDYVVPLCLPERAFSENTLASIRFSRVSGWGQLLDRGATALELMVIEVPRLMT 348

  Fly   227 AQC----RQTRYKDKIAEVMLCAGLVQQGGKDACQGDSGGPLIVN-EGRYKLAGVVSFGYGCAQK 286
            ..|    :.:....:|.|.|.|||.: .|.||||:||||||...: .|.:.|.||||:|.|||..
  Rat   349 QDCLEHAKHSANTPRITENMFCAGYM-DGTKDACKGDSGGPHATHYHGTWYLTGVVSWGEGCAAI 412

  Fly   287 NAPGVYARVSKFLDWIRK 304
            ...|||.|||:::||:.|
  Rat   413 GHIGVYTRVSQYIDWLVK 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3355NP_608848.1 Tryp_SPc 76..305 CDD:238113 87/241 (36%)
F7NP_690059.1 GLA 25..85 CDD:214503
EGF_CA 87..123 CDD:238011
FXa_inhibition 132..168 CDD:464251 3/7 (43%)
Tryp_SPc 194..430 CDD:238113 86/239 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.