DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3355 and svh-1

DIOPT Version :10

Sequence 1:NP_608848.1 Gene:CG3355 / 33667 FlyBaseID:FBgn0031619 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:269 Identity:82/269 - (30%)
Similarity:134/269 - (49%) Gaps:31/269 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SRNQCTAKQNCFCGTPNVN----------RIVGGQQVRSNKYPWTAQL----VKGRHYPRLFCGG 106
            |:|..::...|......||          |:|||.:.....:||||.|    .|..|     ||.
 Worm   683 SQNGMSSASQCGLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKAHH-----CGA 742

  Fly   107 SLINDRYVLTAAHCVHGNRDQITIRLLQID-RSSRDPGIVRKVVQTTVH--PNYDPNRIVNDVAL 168
            |:::..:::|||||...:....:..::..| .:::..|..:......:|  |.| .:...:|:|:
 Worm   743 SILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAI 806

  Fly   169 LKLESP-VPLTGNMRPVCLPEANHNF-DGKTAVVAGWGLIKEGGVTSNYLQEVNVPVITNAQC-R 230
            |::..| :......:|:|||..:..: .|:..||:|||.:  |...:..||...:|:|....| .
 Worm   807 LEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSM--GLRYAERLQAALIPIINRFDCVN 869

  Fly   231 QTRYKDKIAEVMLCAGLVQQGGKDACQGDSGGPLIV--NEGRYKLAGVVSFGYGCAQKNAPGVYA 293
            .::....::....|||.: :||.|:||||||||...  .:|.:.||||:|:|.|||||..||:|.
 Worm   870 SSQIYSSMSRSAFCAGYL-EGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYT 933

  Fly   294 RVSKFLDWI 302
            .|:.:|.||
 Worm   934 MVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3355NP_608848.1 Tryp_SPc 76..305 CDD:238113 76/239 (32%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 76/239 (32%)
Blue background indicates that the domain is not in the aligned region.

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