DRSC/TRiP Functional Genomics Resources

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Protein Alignment: HP6 and swi6

Sequence 1:NP_608842.1 Gene:HP6 FlyBaseID:FBgn0031613 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_593449.1 Gene:swi6 PomBaseID:SPAC664.01c Length:328 Species:Schizosaccharomyces pombe

Alignment Length:91 Identity:21/92 (23%)
Similarity:33/92 (36%) Gaps:33/92 (36%)


  Fly     6 LTSSTALPVKQRNGFDLGLEPLRILGACNW--------------SGKLTFLMQWKGCDEAGLV-- 54
            |..:..|.|||...:|            :|              .|.|...:.||.    |.:  
pombe   252 LPDNRELTVKQVENYD------------SWEDLVSSIDTIERKDDGTLEIYLTWKN----GAISH 300

  Fly    55 -PAEVLNVRCPQMVISFYEERIVFTD 79
             |:.:.|.:|||.::.|||..:.|.:
pombe   301 HPSTITNKKCPQKMLQFYESHLTFRE 326

Known Domains:


GeneSequenceDomainRegion External IDIdentity
HP6NP_608842.1 Chromo_shadow 25..76 CDD:279701 14/68 (21%)
swi6NP_593449.1 CHROMO 85..134 CDD:237991
ChSh 261..326 CDD:197638 18/81 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR22812
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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