DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paris and jim

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster


Alignment Length:17 Identity:6/17 - (35%)
Similarity:10/17 - (58%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 SSLSDFADDRFGSIYQS 120
            ||:|...:|...|.::|
  Fly     2 SSISGLVEDEISSFFES 18

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368
C2H2 Zn finger 156..176 CDD:275368
COG5048 <180..341 CDD:227381
C2H2 Zn finger 184..204 CDD:275368
C2H2 Zn finger 212..232 CDD:275368
C2H2 Zn finger 240..260 CDD:275368
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368
COG5048 355..666 CDD:227381
C2H2 Zn finger 359..379 CDD:275368
C2H2 Zn finger 387..407 CDD:275368
C2H2 Zn finger 415..435 CDD:275368
C2H2 Zn finger 527..547 CDD:275368
C2H2 Zn finger 555..575 CDD:275368
C2H2 Zn finger 583..603 CDD:275368
C2H2 Zn finger 611..631 CDD:275368
C2H2 Zn finger 639..661 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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