DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Paris and CG11247

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:344 Identity:92/344 - (26%)
Similarity:135/344 - (39%) Gaps:101/344 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 ISEDEDARIDSASAADDDGKSDSKKVAFE----------CRECHKKYQRKGTFLRHMRTHMDGQS 153
            :.|:||...:..|..||..:...||.|.:          |.:|.|::..|....|||..|.|.:.
  Fly    56 VDEEEDDGGEQDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQRHMLIHSDERP 120

  Fly   154 FPCPYCKRNFRLRVTLKAHMKT-HNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSK 217
            ..|..|.:::|..|.||.|:.| |...|.:.||.|.|:||.:..|:.|.|.|:||:|:.|..|.|
  Fly   121 HKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDK 185

  Fly   218 TFIKSSDLRRHIRTH--GSERPFKCSKCT------------------------------------ 244
            .|.:...|::|:.:|  .|.:.|.|:||:                                    
  Fly   186 KFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELA 250

  Fly   245 ----------------------------------------KT---------FTRKFHLDNHFRSH 260
                                                    ||         ||:|...:.|.|.|
  Fly   251 LRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMH 315

  Fly   261 TGERPFKCSHCPKAFAMKQHLKQHSRLHLPDRPFRCSHCPK--TFRLSSTLKEH-KLVHNAERTF 322
            |||||::|..|.:.||....||.|.|.|..::||||..|..  .|...:.||.| |.:|..::.:
  Fly   316 TGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHLKNHMKKIHKQQKPY 380

  Fly   323 KCPHCASFYKQRKTLARHI 341
            .|..|..|:|.:..|..|:
  Fly   381 MCEGCHDFFKIKVELQSHV 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 7/19 (37%)
C2H2 Zn finger 156..176 CDD:275368 8/20 (40%)
COG5048 <180..341 CDD:227381 64/250 (26%)
C2H2 Zn finger 184..204 CDD:275368 9/19 (47%)
C2H2 Zn finger 212..232 CDD:275368 6/19 (32%)
C2H2 Zn finger 240..260 CDD:275368 10/104 (10%)
C2H2 Zn finger 268..288 CDD:275368 8/19 (42%)
C2H2 Zn finger 296..316 CDD:275368 7/22 (32%)
C2H2 Zn finger 324..341 CDD:275368 5/16 (31%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 44/158 (28%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
C2H2 Zn finger 123..144 CDD:275368 8/20 (40%)
C2H2 Zn finger 152..172 CDD:275368 9/19 (47%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
COG5048 <192..369 CDD:227381 38/176 (22%)
C2H2 Zn finger 210..230 CDD:275370 3/19 (16%)
C2H2 Zn finger 238..260 CDD:275371 0/21 (0%)
C2H2 Zn finger 267..287 CDD:275368 0/19 (0%)
C2H2 Zn finger 295..315 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 7/22 (32%)
C2H2 Zn finger 382..399 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.