DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paris and LOC100494833

DIOPT Version :10

Sequence 1:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_002942448.3 Gene:LOC100494833 / 100494833 XenbaseID:XB-GENE-29082427 Length:552 Species:Xenopus tropicalis


Alignment Length:387 Identity:111/387 - (28%)
Similarity:160/387 - (41%) Gaps:92/387 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QCT--------GFEVKRGDLFSEMICP----------QCYEDVKSAYGIRQTCEESHQFYC-RVR 80
            :||        .|:|::.||....:.|          :.|.|.      ..|||...|... |::
 Frog   139 RCTEEERRAGRDFKVEQADLVHTEVIPTDAIKTEAPSEDYPDT------APTCENETQIPTDRLQ 197

  Fly    81 DEGIEDALCALLEEEDWEISEDEDARIDSASAADDDGKSDSKKVAFECRECHKKYQRKGTFLRHM 145
            ...|.:...:.||..    ..|..:|......:.||..:...| .:.|.:|.|.:..:..::.|.
 Frog   198 GAAIGNDFHSSLEAH----LPDSPSRHRKMECSSDDTDTPEAK-GYTCTDCGKHFTIESDYICHQ 257

  Fly   146 RTHMDGQSFPCPYCKRNFRLRVTLKAH-----------------------------------MKT 175
            ||| ..:.|.|..|...|.....|..|                                   :.|
 Frog   258 RTH-SPEMFRCSDCHNCFGSLAELVIHQTLYKEQCGKTVLSRGKSPTQQSERQGKGGKGVTQLVT 321

  Fly   176 HNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKC 240
            :|..||:.||.|.|:|.::|.|..|::.|:|||||.||:|.|.|.:||.|..|..||..|:||.|
 Frog   322 NNGVKPFTCSECGKSFTKRSNLTMHQKIHSGERPFSCSECGKCFTQSSKLLIHQGTHTEEKPFAC 386

  Fly   241 SKCTKTFTRKFHLDNHFRSHTGERPFK--------------------------CSHCPKAFAMKQ 279
            |:|.|:|::..:|..|.|.||||:||.                          ||:|.|.|:.|.
 Frog   387 SECGKSFSQMGYLLTHKRIHTGEKPFSCPQCGKLFTRKSTLLKHQRIHTGSFPCSYCGKCFSQKS 451

  Fly   280 HLKQHSRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLARHI 341
            :|..|.|:|..::||.|:.|.|.|...|.|.:|:.||..||.|.|.||...:.|...|..|:
 Frog   452 NLMSHQRIHTREKPFACASCDKCFTDKSALIKHERVHTGERPFICTHCGKGFTQITHLTTHL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParisNP_608840.1 zf-AD 4..78 CDD:462262 13/61 (21%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 5/54 (9%)
COG5048 <180..341 CDD:227381 73/186 (39%)
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
C2H2 Zn finger 212..232 CDD:275368 9/19 (47%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 9/19 (47%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..341 CDD:275368 5/16 (31%)
LOC100494833XP_002942448.3 KRAB_A-box 86..>110 CDD:143639
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
C2H2 Zn finger 267..284 CDD:275370 4/16 (25%)
COG5048 <322..529 CDD:227381 75/192 (39%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 9/19 (47%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
C2H2 Zn finger 414..434 CDD:275368 0/19 (0%)
C2H2 Zn finger 440..460 CDD:275368 9/19 (47%)
C2H2 Zn finger 468..488 CDD:275368 7/19 (37%)
C2H2 Zn finger 496..516 CDD:275368 6/18 (33%)
C2H2 Zn finger 524..544 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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