Sequence 1: | NP_477416.1 | Gene: | Traf4 / 33638 | FlyBaseID: | FBgn0026319 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038968511.1 | Gene: | Traf3 / 362788 | RGDID: | 1304633 | Length: | 610 | Species: | Rattus norvegicus |
Alignment Length: | 523 | Identity: | 136/523 - (26%) |
---|---|---|---|
Similarity: | 206/523 - (39%) | Gaps: | 162/523 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 DELRKLKGHLNACKHDATQCPN----------------KCGAQIPRIMMTDHLQYTCTMRRTRC- 164
Fly 165 -EFCQSEFSGAGLEEH----------NGSCGQEPVYC-EAKCGQRILRGRMTLHKSKDCAKRLRR 217
Fly 218 CAHCQREFSADTLPLHA-AQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGCR 281
Fly 282 FKGPRQMLEAHLESNAAAHLSLM----------VAL----SSRQGQQIQML-------------- 318
Fly 319 ---------------------------------------------KSAVSKL------------- 325
Fly 326 ----------------------------------------SINYTGTLLWKITDWSAKMAEARGK 350
Fly 351 DGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFE 415
Fly 416 QGAQSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFISHELLHSRPFIKGDTVFLRVKVDP 480
Fly 481 SKI 483 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Traf4 | NP_477416.1 | PLN03086 | <109..206 | CDD:178635 | 24/117 (21%) |
zf-TRAF | 233..292 | CDD:424248 | 23/59 (39%) | ||
MATH_TRAF4 | 331..479 | CDD:239750 | 59/147 (40%) | ||
Traf3 | XP_038968511.1 | RING-HC_TRAF3 | 93..134 | CDD:319554 | 8/40 (20%) |
zf-TRAF | 178..234 | CDD:280357 | 17/55 (31%) | ||
zf-TRAF | 239..289 | CDD:424248 | 21/50 (42%) | ||
Smc | <294..>475 | CDD:224117 | 22/180 (12%) | ||
MATH_TRAF3 | 420..605 | CDD:239746 | 62/187 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D391991at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |