DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atet and ABCG8

DIOPT Version :10

Sequence 1:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_200098.1 Gene:ABCG8 / 835363 AraportID:AT5G52860 Length:589 Species:Arabidopsis thaliana


Alignment Length:721 Identity:179/721 - (24%)
Similarity:291/721 - (40%) Gaps:176/721 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 LPQRPPVD-----IEFCDISYSVTDSHRRGFKT---------------ILKSVSGKFRNGEITAI 181
            :|..||.:     :....|||::.       ||               ||::::......||.|:
plant     3 IPPSPPPETAAYTLTTSSISYTIP-------KTSLSLLRFPATEPPSFILRNITLTAHPTEILAV 60

  Fly   182 MGPSGAGKSTLMNILAGYKTAQLSGSVLINSKERNLRRFRKLSCYIMQDDVLIANLTVREAMMVA 246
            :||||||||||::|||. ||:..|||:|:||...|...:||:|.|:.|.|.....|||.|....|
plant    61 VGPSGAGKSTLLDILAS-KTSPTSGSILLNSIPINPSSYRKISSYVPQHDSFFPLLTVSETFSFA 124

  Fly   247 ANLKL-GKNMISYAKVVVVEEILETIGLKESVNT-LTCNLSGGQRKRLSIALELVNNPPVMFFDE 309
            |.|.| ..:::|    ..|..:|..:.|....:| |...||||:|:|:||.|.|:::|..:..||
plant   125 ACLLLPNPSIVS----ETVTSLLSELNLTHLSHTRLAQGLSGGERRRVSIGLSLLHDPCFLLLDE 185

  Fly   310 PTSGLDSSTCFQLISLLRSLA-RGGRTIVCTIHQPSARLFEKFDHLYLLAQGQCVYEGRVKGLVP 373
            |||||||.:.|.:|.:|:|:| ...||::.:|||||.::....|.|.||::|..||.||:..|..
plant   186 PTSGLDSKSAFDVIHILKSIAVSRQRTVILSIHQPSFKILSIIDRLLLLSKGTVVYHGRLDSLEG 250

  Fly   374 YLSSLGYECPSYHNPADYVLEVASGEYGDAVPKLVDAVKSGACKKYAHKDYVLTLAQKGCNNDII 438
            :|...|:..|...|..:|.:|:                             :..|.:...|.|  
plant   251 FLLFKGFTVPPQLNSLEYAMEI-----------------------------LQELRESDGNTD-- 284

  Fly   439 KGSGSGAENAMAILTLEDEKPPLEDRQLEPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAV 503
                     |.|:.::|:.|                              |....|:|.      
plant   285 ---------ATALPSIENRK------------------------------QREKQSIVR------ 304

  Fly   504 DDSCSFSSSKGTQNAVGGSGSGGPSAVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRS 568
                                                             :..|..|:..:|.:|.
plant   305 -------------------------------------------------YRKSRITEISLLARRF 320

  Fly   569 FRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCIFFVSLFTTFTAMMPTILTF 633
            ::.|.|.:.|........::||.::|.||.::|...:.|....|...|...| ..::...|:..|
plant   321 WKIIYRTRQLLLTNALEALVVGLVLGTIYINIGIGKAGIEKRFGMFAFTLTF-LLSSTTETLPIF 384

  Fly   634 PTEMSVFVREHLNYWYSLKAFYFAKTIADMPFQIVFSSVYVLVVYYLTSQPMELERVSMFVLICV 698
            ..|..:.:||..:..|.|.:...|.|:..:|:..|.|.:|.:.||:|.......:....|||:..
plant   385 INERPILLRETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIW 449

  Fly   699 LNSLVAQSLGLLIGA-GMNIETGVFLGPVTTIPTILFSGFFVNFDTIPGYLQWVTYVSYVRYGFE 762
            :..|:|.|..|.:.: ..|..||..|..:......||||:|::.:::|.|..::.:.|..:|..:
plant   450 IILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALD 514

  Fly   763 GAMVAIYGMDRAKM-----QCNQMYCHYR----VPKKFLEEMSMDNALFWVDAVALIGIFFALRI 818
            ..::..|....:|.     :.....|...    :.||.|.|...     |.:...|:|.|...|:
plant   515 ALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEKQR-----WFNVYVLLGFFVLYRV 574

  Fly   819 IAYFVL 824
            :.:..|
plant   575 LCFLAL 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtetNP_523471.2 3a01204 137..825 CDD:273361 179/721 (25%)
ABCG8NP_200098.1 3a01204 44..584 CDD:273361 171/673 (25%)

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